MirGeneDB

90 Branchiostoma floridae microRNA genes
Sort by genome coordinates Motifs Tissue expression
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Gene name MiRBase ID Family 5p accession 3p accession Chromosome Start End Strand Node of origin (gene) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Bfl-Let-7-P20 bfl-let-7a-1 LET-7 MIMAT0009462 MIMAT0019176 Bf_V2_28 2706007 2706073 + B. floridae Bilateria No 1
Bfl-Let-7-P21 bfl-let-7a-2 LET-7 MIMAT0009462 None Bf_V2_28 2707867 2707933 + B. floridae Bilateria No 1
Bfl-Mir-1 bfl-mir-1 MIR-1 MIMAT0019137 MIMAT0009463 Bf_V2_185 1444192 1444251 + Bilateria Bilateria No 1
Bfl-Mir-7 bfl-mir-7 MIR-7 MIMAT0009464 None Bf_V2_119 1621051 1621113 - Bilateria Bilateria Unknown 1 1 1
Bfl-Mir-8-P1 bfl-mir-200c MIR-8 None MIMAT0009493 Bf_V2_211 358780 358837 - Chordata Bilateria No 1 1
Bfl-Mir-8-P2 bfl-mir-200b MIR-8 None MIMAT0009492 Bf_V2_211 355985 356045 - Chordata Bilateria No 1 1
Bfl-Mir-8-P3-v1 bfl-mir-200a MIR-8 None MIMAT0009491 Bf_V2_211 361522 361578 - B. floridae Bilateria Yes 1
Bfl-Mir-8-P3-v2 bfl-mir-200a MIR-8 None MIMAT0009491 Bf_V2_211 361522 361578 - B. floridae Bilateria Yes
Bfl-Mir-9-P5 bfl-mir-9-1 MIR-9 MIMAT0009465 MIMAT0009477 Bf_V2_430 38056 38116 + B. floridae Bilateria Unknown 1 1
Bfl-Mir-9-P6 bfl-mir-9-2 MIR-9 MIMAT0009465 MIMAT0009477 Bf_V2_195 400338 400398 + B. floridae Bilateria Unknown 1 1
Bfl-Mir-10-P1-v1 bfl-mir-10a MIR-10 MIMAT0009466 MIMAT0009467 Bf_V2_12 933249 933311 + B. floridae Eumetazoa No 1
Bfl-Mir-10-P1-v2 bfl-mir-10a MIR-10 MIMAT0009466 MIMAT0009467 Bf_V2_12 933250 933310 + B. floridae Eumetazoa No
Bfl-Mir-10-P2-v1 bfl-mir-100 MIR-10 MIMAT0009481 MIMAT0019145 Bf_V2_28 2705753 2705809 + B. floridae Eumetazoa No 1
Bfl-Mir-10-P2-v2 bfl-mir-100 MIR-10 MIMAT0009481 MIMAT0019145 Bf_V2_28 2705754 2705808 + B. floridae Eumetazoa No 1
Bfl-Mir-10-P3 bfl-mir-125a MIR-10 MIMAT0009483 MIMAT0019147 Bf_V2_28 2707569 2707623 + Bilateria Eumetazoa No 1 1
Bfl-Mir-10-P7 bfl-mir-10b MIR-10 MIMAT0009468 None Bf_V2_12 883016 883076 + B. floridae Eumetazoa Unknown 1 1
Bfl-Mir-10-P8 bfl-mir-10c MIR-10 MIMAT0009469 None Bf_V2_12 795194 795252 + B. floridae Eumetazoa Unknown 1 1
Bfl-Mir-22-P1 bfl-mir-22 MIR-22 MIMAT0019138 MIMAT0009470 Bf_V2_18 2394948 2395005 + Bilateria Bilateria No 1
Bfl-Mir-29-P1 bfl-mir-29a MIR-29 MIMAT0019139 MIMAT0009471 623591315_APWS107249 738 797 + Bilateria Bilateria No 1
Bfl-Mir-29-P2 bfl-mir-29b MIR-29 MIMAT0019140 MIMAT0009472 539444465_AFPZ577358 742 800 - Bilateria Bilateria No 1
Bfl-Mir-31 bfl-mir-31 MIR-31 MIMAT0009473 MIMAT0019141 Bf_V2_278 268475 268535 - Bilateria Bilateria Unknown
Bfl-Mir-33-P3 bfl-mir-33-1 MIR-33 MIMAT0009474 None Bf_V2_21 4947548 4947606 - B. floridae Bilateria No 1
Bfl-Mir-33-P4 bfl-mir-33-2 MIR-33 MIMAT0009474 None Bf_V2_21 4947957 4948015 - B. floridae Bilateria Yes 1 1
Bfl-Mir-34-P5a bfl-mir-34a MIR-34 MIMAT0009475 None Bf_V2_288 336229 336285 + B. floridae Bilateria Unknown
Bfl-Mir-34-P5b bfl-mir-34a MIR-34 MIMAT0009475 None Bf_V2_269 1087766 1087822 - B. floridae Bilateria Unknown 1
Bfl-Mir-34-P6 bfl-mir-34b MIR-34 MIMAT0019174 MIMAT0010002 Bf_V2_38 2117613 2117672 - B. floridae Bilateria No 1 1
Bfl-Mir-34-P6a None MIR-34 None None Bf_V2_269 1073951 1074013 - B. floridae Bilateria Unknown 1
Bfl-Mir-34-P6b None MIR-34 None None Bf_V2_269 1073951 1074013 - B. floridae Bilateria Unknown 1
Bfl-Mir-34-P7a bfl-mir-34c-1 MIR-34 None MIMAT0020451 Bf_V2_288 335477 335538 + B. floridae Bilateria No 1
Bfl-Mir-34-P7b bfl-mir-34c-2 MIR-34 None MIMAT0020451 Bf_V2_269 1088513 1088574 - B. floridae Bilateria No 1
Bfl-Mir-71 bfl-mir-71 MIR-71 MIMAT0009476 MIMAT0019142 Bf_V2_187 5824859 5824918 - Bilateria Bilateria No
Bfl-Mir-92-o1 bfl-mir-92a-1 MIR-92 None MIMAT0009478 Bf_V2_216 777197 777255 - B. floridae Bilateria No 1
Bfl-Mir-92-o2a bfl-mir-92a-2 MIR-92 None MIMAT0009478 Bf_V2_216 776307 776364 - B. floridae Bilateria No 1
Bfl-Mir-92-o2b bfl-mir-92a-3 MIR-92 None MIMAT0009478 Bf_V2_216 774441 774498 - B. floridae Bilateria No 1
Bfl-Mir-92-o3 bfl-mir-92b MIR-92 MIMAT0019143 MIMAT0009479 Bf_V2_106 372730 372791 + B. floridae Bilateria No 1
Bfl-Mir-92-o4 bfl-mir-92c MIR-92 None MIMAT0010010 Bf_V2_106 372310 372363 + B. floridae Bilateria No 1 1
Bfl-Mir-92-o5 bfl-mir-92d MIR-92 MIMAT0020079 None Bf_V2_165 210802 210862 + B. floridae Bilateria No 1 1
Bfl-Mir-92-o6 bfl-mir-2059 MIR-92 MIMAT0019168 MIMAT0009985 Bf_V2_109 1619225 1619282 + B. floridae Bilateria Unknown 1 1
Bfl-Mir-92-o7 bfl-mir-2063 MIR-92 None MIMAT0009989 Bf_V2_223 848290 848354 - B. floridae Bilateria No 1 1
Bfl-Mir-96-P1 bfl-mir-96 MIR-96 MIMAT0009480 MIMAT0019144 Bf_V2_186 1109818 1109877 + Bilateria Bilateria No
Bfl-Mir-96-P2a bfl-mir-182a MIR-96 MIMAT0009486 None Bf_V2_369 120319 120395 - B. floridae Bilateria Unknown 1
Bfl-Mir-96-P2b bfl-mir-182b MIR-96 None MIMAT0020081 Bf_V2_369 120023 120102 - B. floridae Bilateria No 1
Bfl-Mir-96-P2c bfl-mir-182d MIR-96 None MIMAT0020484 Bf_V2_196 2749759 2749819 + B. floridae Bilateria Unknown
Bfl-Mir-96-P3 bfl-mir-183 MIR-96 MIMAT0009487 None Bf_V2_186 1108737 1108795 + Bilateria Bilateria No
Bfl-Mir-103 bfl-mir-2013 MIR-103 None MIMAT0009991 Bf_V2_13 1075349 1075415 + Deuterostomia Deuterostomia No 1 1
Bfl-Mir-124 bfl-mir-124 MIR-124 MIMAT0019146 MIMAT0009482 Bf_V2_32 1879934 1879992 + Bilateria Bilateria No 1
Bfl-Mir-129-P3 bfl-mir-129a MIR-129 MIMAT0010008 MIMAT0010009 Bf_V2_39 4848665 4848724 + B. floridae Chordata Unknown
Bfl-Mir-129-P4 bfl-mir-129b MIR-129 MIMAT0020080 None Bf_V2_23 670501 670558 + B. floridae Chordata Unknown 1 1
Bfl-Mir-133-v1 bfl-mir-133 MIR-133 None MIMAT0009484 538437112_AFPZ209224 434 493 + Bilateria Bilateria No
Bfl-Mir-133-v2 bfl-mir-133 MIR-133 None MIMAT0009484 538437112_AFPZ209224 434 493 + Bilateria Bilateria No
Bfl-Mir-135-P5a bfl-mir-135a-1 MIR-135 MIMAT0009992 None Bf_V2_158 3848779 3848837 - B. floridae Chordata Unknown 1 1
Bfl-Mir-135-P5b bfl-mir-135a-2 MIR-135 MIMAT0009992 None Bf_V2_158 3847412 3847470 - B. floridae Chordata Unknown 1 1
Bfl-Mir-135-P6a bfl-mir-135b-1 MIR-135 MIMAT0010194 None Bf_V2_158 3848997 3849054 - B. floridae Chordata Unknown 1
Bfl-Mir-135-P6b bfl-mir-135b-2 MIR-135 MIMAT0010194 None Bf_V2_158 3847625 3847682 - B. floridae Chordata Unknown 1
Bfl-Mir-137 bfl-mir-137 MIR-137 None MIMAT0009485 Bf_V2_114 165553 165614 - Bilateria Bilateria No 1
Bfl-Mir-153 bfl-mir-153 MIR-153 None MIMAT0025391 Bf_V2_242 768195 768254 + Bilateria Bilateria Unknown 1
Bfl-Mir-184 bfl-mir-184 MIR-184 MIMAT0019148 MIMAT0009488 Bf_V2_163 176180 176244 - Bilateria Bilateria No 1 1
Bfl-Mir-190 bfl-mir-190 MIR-190 MIMAT0009489 None Bf_V2_201 1087920 1087978 - Bilateria Bilateria Unknown 1 1
Bfl-Mir-193-P1e bfl-mir-193a MIR-193 None MIMAT0009490 Bf_V2_23 3615158 3615216 - B. floridae Bilateria Unknown 1
Bfl-Mir-193-P1f bfl-mir-193b MIR-193 None MIMAT0020111 Bf_V2_36 4032852 4032911 - B. floridae Bilateria No
Bfl-Mir-210 bfl-mir-210 MIR-210 MIMAT0019149 MIMAT0009494 Bf_V2_39 678337 678399 - Bilateria Bilateria No 1 1 1
Bfl-Mir-216-P1 bfl-mir-216 MIR-216 MIMAT0009495 MIMAT0019150 Bf_V2_29 961718 961778 - Bilateria Bilateria No 1
Bfl-Mir-217 bfl-mir-217 MIR-217 MIMAT0009496 None Bf_V2_29 960805 960862 - Chordata Chordata Unknown 1 1
Bfl-Mir-219 bfl-mir-219 MIR-219 MIMAT0010012 None Bf_V2_250 1137882 1137940 + Bilateria Bilateria Unknown 1
Bfl-Mir-242 bfl-mir-242 MIR-242 MIMAT0009497 None Bf_V2_117 716478 716533 + Bilateria Bilateria Unknown
Bfl-Mir-252-P1 bfl-mir-252a MIR-252 MIMAT0009498 None Bf_V2_101 1038974 1039031 + Bilateria Bilateria Unknown 1 1
Bfl-Mir-252-P2 bfl-mir-252b MIR-252 MIMAT0009499 MIMAT0019151 Bf_V2_101 1038256 1038320 + Bilateria Bilateria No
Bfl-Mir-278 bfl-mir-278 MIR-278 None MIMAT0010135 Bf_V2_6 3266625 3266686 - Bilateria Bilateria No 1
Bfl-Mir-281 bfl-mir-281 MIR-281 None MIMAT0009500 Bf_V2_151 904359 904418 + Bilateria Bilateria No 1
Bfl-Mir-375 bfl-mir-375 MIR-375 None MIMAT0009501 Bf_V2_285 289803 289865 - Bilateria Bilateria No 1
Bfl-Mir-2058 bfl-mir-2058 MIR-2058 MIMAT0009984 MIMAT0019167 Bf_V2_93 857177 857235 + B. floridae B. floridae No 1 1 1
Bfl-Mir-2062 bfl-mir-2062 MIR-2062 MIMAT0009988 MIMAT0019169 Bf_V2_166 2072227 2072285 - B. floridae B. floridae No 1
Bfl-Mir-2066-P1 bfl-mir-2066 MIR-2066 None MIMAT0009994 Bf_V2_32 2941424 2941483 - B. floridae B. floridae No 1 1
Bfl-Mir-2066-P2 bfl-mir-2067 MIR-2066 None MIMAT0009995 Bf_V2_32 2938958 2939018 - B. floridae B. floridae Yes
Bfl-Mir-2068 bfl-mir-2068 MIR-2068 MIMAT0009996 MIMAT0019170 Bf_V2_32 1589840 1589896 - B. floridae B. floridae No 1
Bfl-Mir-2070 bfl-mir-2070 MIR-2070 MIMAT0009998 MIMAT0019171 Bf_V2_147 2113647 2113707 - B. floridae B. floridae No 1
Bfl-Mir-2076 bfl-mir-2076 MIR-2076 MIMAT0010005 MIMAT0019175 Bf_V2_136 88228 88284 + B. floridae B. floridae No
Bfl-Mir-4857 bfl-mir-4857 MIR-4857 MIMAT0020083 None Bf_V2_118 217929 217992 + B. floridae B. floridae No 1
Bfl-Mir-4859 bfl-mir-4859 MIR-4859 MIMAT0020086 MIMAT0020087 Bf_V2_28 2310470 2310529 + B. floridae B. floridae No 1
Bfl-Mir-4860 bfl-mir-4860 MIR-4860 MIMAT0020088 MIMAT0020089 Bf_V2_122 1823462 1823523 - B. floridae B. floridae No 1 1 1
Bfl-Mir-4862 bfl-mir-4862 MIR-4862 MIMAT0020091 MIMAT0020092 Bf_V2_118 218833 218890 + B. floridae B. floridae No 1
Bfl-Mir-4864 bfl-mir-4864 MIR-4864 MIMAT0020097 MIMAT0020098 Bf_V2_158 1384082 1384144 - B. floridae B. floridae No 1
Bfl-Mir-4868-P1 bfl-mir-4868a MIR-4868 None MIMAT0020104 Bf_V2_163 118502 118561 + B. floridae B. floridae Yes 1 1
Bfl-Mir-4868-P2 bfl-mir-4868b MIR-4868 None MIMAT0020105 Bf_V2_163 129206 129265 + B. floridae B. floridae Yes 1
Bfl-Mir-4868-P3 bfl-mir-4868c MIR-4868 MIMAT0020106 MIMAT0020107 Bf_V2_9 709107 709165 - B. floridae B. floridae No 1 1
Bfl-Mir-4871 bfl-mir-4871 MIR-4871 MIMAT0020112 MIMAT0020113 Bf_V2_127 1679947 1680009 - B. floridae B. floridae No 1
Bfl-Mir-4874 bfl-mir-4874 MIR-4874 MIMAT0020453 MIMAT0020454 Bf_V2_186 1687494 1687554 - B. floridae B. floridae No 1
Bfl-Mir-4879 bfl-mir-4879 MIR-4879 MIMAT0020462 None Bf_V2_243 638070 638128 + B. floridae B. floridae No
Bfl-Mir-4881 bfl-mir-4881 MIR-4881 MIMAT0020464 None Bf_V2_19 551622 551684 + B. floridae B. floridae No 1
Bfl-Mir-4887 bfl-mir-4887 MIR-4887 MIMAT0020474 None Bf_V2_200 1228485 1228541 - B. floridae B. floridae No 1

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