Mir
Gene
DB
2.1
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69 microRNA genes with seed AGCCCUU
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
▼
CNNC
Hsa-Mir-129-P1
hsa-mir-129-2
MIR-129
AGCCCUU
MIMAT0000242
MIMAT0004605
chr11
43581408
43581471
+
Gnathostomata
Chordata
No
1
1
1
Ami-Mir-129-P1
ami-mir-129b
MIR-129
UUUUUGC
MIMAT0038138
MIMAT0038139
NW_017713697.1
10867520
10867584
-
Gnathostomata
Chordata
No
1
1
1
Mml-Mir-129-P1
mml-mir-129-2
MIR-129
AGCCCUU
MIMAT0006185
MIMAT0031083
chr14
22449821
22449884
-
Gnathostomata
Chordata
No
1
1
1
Mmu-Mir-129-P1
mmu-mir-129-2
MIR-129
UUUUUGC
MIMAT0000209
MIMAT0000544
chr2
94241376
94241439
-
Gnathostomata
Chordata
No
1
1
1
Pbv-Mir-129-P1
None
MIR-129
UUUUUGC
None
None
KE954163.1
237650
237714
-
Gnathostomata
Chordata
No
1
1
1
Gja-Mir-129-P1
None
MIR-129
UUUUUGC
None
None
NW_015172598.1
463812
463876
-
Gnathostomata
Chordata
No
1
1
1
Mun-Mir-129-P1
None
MIR-129
UUUUUGC
None
None
129-P1_LR594635.1:160870694-160870958
101
165
+
Gnathostomata
Chordata
No
1
1
1
Ete-Mir-129-P1
None
MIR-129
UUUUUGC
None
None
JH980324
21312941
21313004
+
Gnathostomata
Chordata
No
1
1
1
Loc-Mir-129-P1
None
MIR-129
UUUUUGC
None
None
LG27
1174728
1174792
+
Gnathostomata
Chordata
No
1
1
1
Xla-Mir-129-P1d
None
MIR-129
AGCCCUU
None
None
NC_030731.1
16187756
16187820
-
X. laevis
Chordata
No
1
1
Hsa-Mir-129-P2
hsa-mir-129-1
MIR-129
UUUUUGC
MIMAT0000242
MIMAT0004548
chr7
128207876
128207941
+
Gnathostomata
Chordata
No
1
1
1
Xla-Mir-129-P2d
None
MIR-129
AGCCCUU
None
None
NC_030729.1
62832864
62832929
+
X. laevis
Chordata
No
1
1
Sto-Mir-129-P4
None
MIR-129
AGCCCUU
None
None
BFAA01329546.1
110
172
-
Gnathostomata
Chordata
No
1
1
Ebu-Mir-129-P5
None
MIR-129
AGCCCUU
None
None
FYBX02010046.1
1612329
1612390
-
E. burgeri
Chordata
No
1
1
1
Ebu-Mir-129-P6
None
MIR-129
AGCCCUU
None
None
FYBX02009840.1
144255
144314
-
E. burgeri
Chordata
No
1
1
1
Tni-Mir-129-P1a
tni-mir-129-1
MIR-129
AGCCCUU
MIMAT0003036
None
13
12882721
12882781
+
Clupeocephala
Chordata
No
1
1
1
Gmo-Mir-129-P1a
gmo-mir-129-1
MIR-129
AGCCCUU
MIMAT0044203
MIMAT0044075
GeneScaffold_2632
72857
72921
+
Clupeocephala
Chordata
No
1
1
1
Tni-Mir-129-P2a
None
MIR-129
AGCCCUU
None
None
13
4272364
4272424
+
Clupeocephala
Chordata
No
1
1
1
Gmo-Mir-129-P2a
gmo-mir-129-4
MIR-129
AGCCCUU
MIMAT0044191
MIMAT0044075
GeneScaffold_2432
95798
95859
-
Clupeocephala
Chordata
No
1
1
1
Tni-Mir-129-P1b
None
MIR-129
AGCCCUU
None
None
5
11469568
11469630
+
Clupeocephala
Chordata
No
1
1
1
Gmo-Mir-129-P1b
gmo-mir-129-3
MIR-129
AGCCCUU
MIMAT0044074
MIMAT0044075
contig741416
75
133
-
Clupeocephala
Chordata
No
1
1
Gmo-Mir-129-P2b
gmo-mir-129-2
MIR-129
AGCCCUU
MIMAT0044203
MIMAT0044075
GeneScaffold_4104
11026
11090
+
Clupeocephala
Chordata
No
1
1
1
Xla-Mir-129-P1c
None
MIR-129
AGCCCUU
None
None
NC_030730.1
6936682
6936746
+
X. laevis
Chordata
No
1
1
Xla-Mir-129-P2c
None
MIR-129
AGCCCUU
None
None
NC_030728.1
78252977
78253042
-
X. laevis
Chordata
No
1
1
Cpi-Novel-1
cpi-mir-1729
CPI-NOVEL-1
AGCCCUU
MIMAT0037954
MIMAT0037955
JH584702
3225755
3225811
-
C. picta
C. picta
No
1
1
Mdo-Mir-7373-P3
mdo-mir-7374a
MIR-7373
AGCCCUU
MIMAT0028794
MIMAT0028795
X
44670461
44670515
-
M. domestica
Marsupialia
No
1
1
Pbv-Mir-129-P4
pbv-mir-129b
MIR-129
UUUUUGC
MIMAT0038924
MIMAT0038925
KE953229.1
75187
75254
-
Gnathostomata
Chordata
No
1
Gja-Mir-129-P4
None
MIR-129
UUUUUGC
None
None
NW_015168079.1
600525
600593
+
Gnathostomata
Chordata
No
1
Xla-Mir-129-P4
None
MIR-129
AGCCCUU
None
None
NW_016694863.1
171079
171145
+
Gnathostomata
Chordata
No
1
Mun-Mir-129-P4
None
MIR-129
UUUUUGC
None
None
129-P3_LR594634.1:257500714-257500848
35
101
-
Gnathostomata
Chordata
No
1
Sha-Mir-7373-o4
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2081864
2081918
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o5
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2074961
2075015
-
S. harrisii
Marsupialia
No
1
1
Mdo-Mir-7373-P5d
None
MIR-7373
AGCCCUU
None
None
X
44677391
44677447
-
M. domestica
Marsupialia
No
1
Sha-Mir-7373-o7
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2089434
2089488
-
S. harrisii
Marsupialia
No
1
1
Mdo-Mir-7373-P8
None
MIR-7373
AGCCCUU
None
None
X
44675103
44675159
-
M. domestica
Marsupialia
No
1
1
Sha-Mir-7373-o8h
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2086519
2086576
-
S. harrisii
Marsupialia
No
1
1
Mdo-Mir-7373-P9d
None
MIR-7373
AGCCCUU
None
None
X
44677961
44678017
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P12
mdo-mir-7375d
MIR-7373
AGCCCUU
MIMAT0050432
MIMAT0050433
X
44676823
44676879
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P13
None
MIR-7373
AGCCCUU
None
None
X
44679374
44679430
-
M. domestica
Marsupialia
No
1
Mdo-Mir-7373-P14
mdo-mir-7375c-2
MIR-7373
AGCCCUU
MIMAT0050429
MIMAT0050428
X
44679658
44679714
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P15
None
MIR-7373
AGCCCUU
None
None
X
44680228
44680284
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P16
mdo-mir-7374b
MIR-7373
AGCCCUU
MIMAT0028800
MIMAT0028801
X
44682076
44682130
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P17
mdo-mir-7374d
MIR-7373
AGCCCUU
MIMAT0050434
MIMAT0050435
X
44686440
44686494
-
M. domestica
Marsupialia
No
1
1
Sha-Mir-7373-o8d1
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2085658
2085715
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o8d2
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2084520
2084577
-
S. harrisii
Marsupialia
No
1
1
Mdo-Mir-7373-P4a
None
MIR-7373
AGCCCUU
None
None
X
44673401
44673457
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P5a
None
MIR-7373
AGCCCUU
None
None
X
44673685
44673741
-
M. domestica
Marsupialia
No
1
Mdo-Mir-7373-P5e
None
MIR-7373
AGCCCUU
None
None
X
44677676
44677732
-
M. domestica
Marsupialia
No
1
1
Sha-Mir-7373-o8a
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2083689
2083746
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o8e
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2085084
2085141
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o8i
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2086804
2086861
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o9a
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2081577
2081634
-
S. harrisii
Marsupialia
No
1
1
Mdo-Mir-7373-P9a
None
MIR-7373
AGCCCUU
None
None
X
44675388
44675444
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P9e
None
MIR-7373
AGCCCUU
None
None
X
44679943
44679999
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P4b
None
MIR-7373
AGCCCUU
None
None
X
44678245
44678301
-
M. domestica
Marsupialia
No
1
Mdo-Mir-7373-P5b
None
MIR-7373
AGCCCUU
None
None
X
44673969
44674025
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P5f
None
MIR-7373
AGCCCUU
None
None
X
44678526
44678582
-
M. domestica
Marsupialia
No
Mdo-Mir-7373-P7b
mdo-mir-7375c-3
MIR-7373
AGCCCUU
MIMAT0050429
MIMAT0050428
X
44674818
44674874
-
M. domestica
Marsupialia
No
1
1
Sha-Mir-7373-o8b
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2083966
2084023
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o8f
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2085945
2086002
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o8j
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2087091
2087148
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o9b
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2081002
2081059
-
S. harrisii
Marsupialia
No
1
1
Mdo-Mir-7373-P9b
None
MIR-7373
AGCCCUU
None
None
X
44675670
44675726
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P5c
None
MIR-7373
AGCCCUU
None
None
X
44677107
44677163
-
M. domestica
Marsupialia
No
1
1
Mdo-Mir-7373-P5g
None
MIR-7373
AGCCCUU
None
None
X
44678810
44678866
-
M. domestica
Marsupialia
No
1
1
Sha-Mir-7373-o8c
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2084243
2084300
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o8g
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2086234
2086291
-
S. harrisii
Marsupialia
No
1
1
Sha-Mir-7373-o9c
None
MIR-7373
AGCCCUU
None
None
GL867601.1
2082143
2082200
-
S. harrisii
Marsupialia
No
1
1
Mdo-Mir-7373-P9c
None
MIR-7373
AGCCCUU
None
None
X
44676254
44676310
-
M. domestica
Marsupialia
No
1
1
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