MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7373-o8h

Family name MIR-7373 (all species)
Seed AGCCCUU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7373-o1  Sha-Mir-7373-o2  Sha-Mir-7373-o3  Sha-Mir-7373-o4  Sha-Mir-7373-o5  Sha-Mir-7373-o6  Sha-Mir-7373-o7  Sha-Mir-7373-o8a  Sha-Mir-7373-o8b  Sha-Mir-7373-o8c  Sha-Mir-7373-o8d1  Sha-Mir-7373-o8d2  Sha-Mir-7373-o8e  Sha-Mir-7373-o8f  Sha-Mir-7373-o8g  Sha-Mir-7373-o8i  Sha-Mir-7373-o8j  Sha-Mir-7373-o9a  Sha-Mir-7373-o9b  Sha-Mir-7373-o9c 
Orthologues Mdo-Mir-7373-P8 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL867601.1: 2086519-2086576 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAAAGAAAGACUCACUGAGAUGGCGGGGCAAGCCCUUACCCAACUCUUUGCUAAGUGUUUGUCAAUCAAGGAGAAAGGAAGGGUUGUUCCUUCAUCUCCCAUCUUCACCUCUGGAGG
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Structure
        10          20        30        40        50         
GGAAAGAAAGACUCACU--|      C       G     A  CAA       CUAAGUG 
                   GAGAUGG GGGGCAA CCCUU CC   CUCUUUG       U
                   CUCUACU CCUUGUU GGGAA GG   GAGGAAC       U
GGAGGUCUCCACUUCUACC^      U       -     -  AAA       UAACUGU 
      110       100        90         80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7373-o8h_5p

mirBase accessionNone
Sequence
0- AAGCCCUUACCCAACUCUUUGCU -23
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Co-mature sequence

Sha-Mir-7373-o8h_3p

mirBase accessionNone
Sequence
37- CAAGGAGAAAGGAAGGGUUGU -58
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