MirGeneDB 2.1
MirGeneDB ID

Mdo-Mir-7373-P8

Family name MIR-7373 (all species)
Seed AGCCCUU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID
Paralogues Mdo-Mir-7373-P1a  Mdo-Mir-7373-P1b  Mdo-Mir-7373-P2  Mdo-Mir-7373-P3  Mdo-Mir-7373-P4a  Mdo-Mir-7373-P4b  Mdo-Mir-7373-P5a  Mdo-Mir-7373-P5b  Mdo-Mir-7373-P5c  Mdo-Mir-7373-P5d  Mdo-Mir-7373-P5e  Mdo-Mir-7373-P5f  Mdo-Mir-7373-P5g  Mdo-Mir-7373-P6  Mdo-Mir-7373-P7a  Mdo-Mir-7373-P7b  Mdo-Mir-7373-P9a  Mdo-Mir-7373-P9b  Mdo-Mir-7373-P9c  Mdo-Mir-7373-P9d  Mdo-Mir-7373-P9e  Mdo-Mir-7373-P10  Mdo-Mir-7373-P11  Mdo-Mir-7373-P12  Mdo-Mir-7373-P13  Mdo-Mir-7373-P14  Mdo-Mir-7373-P15  Mdo-Mir-7373-P16  Mdo-Mir-7373-P17  Mdo-Mir-7373-P18  Mdo-Mir-7373-P19  Mdo-Mir-7373-P20-v1  Mdo-Mir-7373-P20-v2  Mdo-Mir-7373-P21 
Orthologues Sha-Mir-7373-o8a  Sha-Mir-7373-o8b  Sha-Mir-7373-o8c  Sha-Mir-7373-o8d1  Sha-Mir-7373-o8d2  Sha-Mir-7373-o8e  Sha-Mir-7373-o8f  Sha-Mir-7373-o8g  Sha-Mir-7373-o8h  Sha-Mir-7373-o8i  Sha-Mir-7373-o8j 
Node of Origin (locus) M. domestica
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)		 X: 44675103-44675159 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7373-P8)		 Mir-7373-P1b X: 44665891-44665948 [-] UCSC Ensembl
Mir-7373-P1a X: 44666176-44666233 [-] UCSC Ensembl
Mir-7373-P2 X: 44667557-44667611 [-] UCSC Ensembl
Mir-7373-P3 X: 44670461-44670515 [-] UCSC Ensembl
Mir-7373-P6 X: 44674254-44674310 [-] UCSC Ensembl
Mir-7373-P7a X: 44674536-44674592 [-] UCSC Ensembl
Mir-7373-P7b X: 44674818-44674874 [-] UCSC Ensembl
Mir-7373-P10 X: 44675952-44676008 [-] UCSC Ensembl
Mir-7373-P11 X: 44676538-44676594 [-] UCSC Ensembl
Mir-7373-P12 X: 44676823-44676879 [-] UCSC Ensembl
Mir-7373-P14 X: 44679658-44679714 [-] UCSC Ensembl
Mir-7373-P16 X: 44682076-44682130 [-] UCSC Ensembl
Mir-7373-P17 X: 44686440-44686494 [-] UCSC Ensembl
Mir-7373-P18 X: 44687808-44687862 [-] UCSC Ensembl
Mir-7373-P19 X: 44688087-44688149 [-] UCSC Ensembl
Mir-7373-P20-v1 X: 44688608-44688663 [-] UCSC Ensembl
Mir-7373-P20-v2 X: 44688608-44688663 [-] UCSC Ensembl
Mir-7373-P21 X: 44689543-44689601 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGAAGGAGGACCCACUGAGAUGGAGGGGCUAGCCCUUACCCCCCCAACUAGUAGCAUUAAUCUGUUAGGGUGGGGGAGGGUACUGCUCCUUCAUCUCACAGCACAUCACCCAUCAG
Get precursor sequence
Structure
        10          20        30         40          50       
GGGAAGGAGGACCCACU--             UA-      A    -   -|  U  UAGC 
                   GAGAUGGAGGGGC   GCCCUU CCCC CCC AAC AG    A
                   CUCUACUUCCUCG   UGGGAG GGGG GGG UUG UC    U
GACUACCCACUACACGACA             UCA      -    U   A^  -  UAAU 
     110       100        90        80         70         60
Deep sequencing
Go to detailed chart
CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7373-P8_5p
mirBase accessionNone
Sequence 
0- UAGCCCUUACCCCCCCAACUAG -22
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Star sequence

Mdo-Mir-7373-P8_3p*
mirBase accessionNone
Sequence 
33- UGUUAGGGUGGGGGAGGGUACUGC -57
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