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2.1
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50 microRNA genes of family BANTAM
Sort by genome coordinates
Motifs
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Aae-Bantam
aae-bantam
BANTAM
GAGAUCA
MIMAT0014218
MIMAT0014219
supercont1.49
1579554
1579618
-
Protostomia
Protostomia
No
1
Bge-Bantam
None
BANTAM
GAGAUCA
None
None
KZ614636.1
591905
591964
+
Protostomia
Protostomia
No
Bpl-Bantam
None
BANTAM
GAGAUCA
None
None
QEOQ01000508.1
6576969
6577030
+
Protostomia
Protostomia
Unknown
1
Cgi-Bantam
None
BANTAM
GAGAUCA
None
None
scaffold950
540423
540481
+
Protostomia
Protostomia
No
Cte-Bantam
cte-bantam
BANTAM
GAGAUCA
None
MIMAT0009551
CAPTEscaffold_114
319163
319225
+
Protostomia
Protostomia
No
Dan-Bantam
dan-bantam
BANTAM
GAGAUCA
None
MIMAT0008409
scaffold_13337
6520601
6520660
-
Protostomia
Protostomia
No
Dma-Bantam
None
BANTAM
GAGAUCA
None
None
NC_046176.1
6757482
6757544
-
Protostomia
Protostomia
No
Dme-Bantam
dme-bantam
BANTAM
GAGAUCA
MIMAT0020823
MIMAT0000365
3L
642222
642281
+
Protostomia
Protostomia
No
Dmo-Bantam
dmo-bantam
BANTAM
GAGAUCA
None
MIMAT0008634
scaffold_6680
4143325
4143385
+
Protostomia
Protostomia
No
Dpu-Bantam
dpu-bantam
BANTAM
GAGAUCA
None
MIMAT0012634
DAPPUscaffold_115
370169
370231
+
Protostomia
Protostomia
No
Dsi-Bantam
dsi-bantam
BANTAM
GAGAUCA
None
MIMAT0008861
3L
606947
607006
+
Protostomia
Protostomia
No
Dya-Bantam
dya-bantam
BANTAM
GAGAUCA
None
MIMAT0009057
3L
629668
629727
+
Protostomia
Protostomia
No
Esc-Bantam
None
BANTAM
GAGAUCA
None
None
Esc-Bantam_pre_SRIE01001501.1:3030239-3030378
40
101
-
Protostomia
Protostomia
No
Hme-Bantam
hme-bantam
BANTAM
GAGAUCA
None
MIMAT0024930
HE670669
51613
51673
+
Protostomia
Protostomia
No
Lan-Bantam
None
BANTAM
GAGAUCA
None
None
LFEI01000073
143314
143376
+
Protostomia
Protostomia
No
1
Lgi-Bantam
None
BANTAM
GAGAUCA
None
None
LOTGIsca_212
233725
233783
+
Protostomia
Protostomia
No
Npo-Bantam
None
BANTAM
GAGAUCA
None
None
JACATO010001708.1
33000
33061
+
Protostomia
Protostomia
Unknown
Ovu-Bantam
None
BANTAM
GAGAUCA
None
None
RXHP01075879.1
111414
111475
-
Protostomia
Protostomia
No
Tca-Bantam
tca-bantam
BANTAM
GAGAUCA
MIMAT0019178
MIMAT0010091
LG3
16990366
16990425
+
Protostomia
Protostomia
No
Asu-Bantam-o1
asu-mir-81a
BANTAM
GAGAUCA
None
MIMAT0021474
Scaffold406
346015
346076
+
A. suum
Protostomia
No
1
Asu-Bantam-o2
asu-mir-81c
BANTAM
GAGAUCA
MIMAT0021421
MIMAT0021422
Scaffold20
144531
144589
+
A. suum
Protostomia
No
1
Asu-Bantam-o3
asu-mir-81b
BANTAM
GAGAUCA
MIMAT0021419
MIMAT0021420
Scaffold20
148295
148353
+
A. suum
Protostomia
No
1
1
Cel-Bantam-P1
cel-mir-58a
BANTAM
GAGAUCG
MIMAT0015100
MIMAT0000030
chrIV
3233269
3233335
+
Caenorhabditis
Protostomia
No
1
Cbr-Bantam-P1a
cbr-mir-58a
BANTAM
GAGAUCG
None
MIMAT0000478
IV
9605767
9605840
-
C. briggsae
Protostomia
No
Cbr-Bantam-P1b
cbr-mir-58b
BANTAM
GAGAUCA
None
MIMAT0011482
IV
149584
149644
+
C. briggsae
Protostomia
No
Cbr-Bantam-P2
cbr-mir-80
BANTAM
GAGAUCA
None
MIMAT0000487
III
14440888
14440953
-
Caenorhabditis
Protostomia
No
Cel-Bantam-P2
cel-mir-80
BANTAM
GAGAUCA
MIMAT0000052
MIMAT0000053
chrIII
8865285
8865349
-
Caenorhabditis
Protostomia
No
Cbr-Bantam-P3
cbr-mir-81
BANTAM
GAGAUCA
None
MIMAT0000488
X
4359703
4359767
-
Caenorhabditis
Protostomia
No
Cel-Bantam-P3
cel-mir-81
BANTAM
GAGAUCA
MIMAT0015109
MIMAT0000054
chrX
2431096
2431159
+
Caenorhabditis
Protostomia
No
Cbr-Bantam-P4
cbr-mir-82
BANTAM
GAGAUCA
None
MIMAT0000489
X
4356782
4356845
+
Caenorhabditis
Protostomia
No
Cel-Bantam-P4
cel-mir-82
BANTAM
GAGAUCA
MIMAT0020323
MIMAT0000055
chrX
2435273
2435333
-
Caenorhabditis
Protostomia
No
Cel-Bantam-P5a
cel-mir-2209a
BANTAM
GAGAUCA
MIMAT0011431
MIMAT0011432
chrIV
1027102
1027164
+
C. elegans
Protostomia
No
Cel-Bantam-P5b
cel-mir-2209b
BANTAM
GAGAUGA
MIMAT0011453
MIMAT0011454
chrIV
1021303
1021365
-
C. elegans
Protostomia
No
1
Cel-Bantam-P5c
cel-mir-2209c
BANTAM
AAAGACC
MIMAT0011433
MIMAT0011434
chrIV
1027219
1027281
+
C. elegans
Protostomia
No
Efe-Bantam-P6
None
BANTAM
GAGAUCA
None
None
Efet.01.59348
454
515
+
E. fetida
Protostomia
No
Efe-Bantam-P7
None
BANTAM
GAGAUCA
None
None
Efet.01.127987
1361
1420
-
E. fetida
Protostomia
No
Efe-Bantam-P8
None
BANTAM
GAGAUCA
None
None
Efet.01.377353
2266
2325
+
E. fetida
Protostomia
No
1
Isc-Bantam-P9a
isc-bantam
BANTAM
GAGAUCA
None
MIMAT0012679
DS616556
1196
1256
-
I. scapularis
Protostomia
No
Isc-Bantam-P9b
isc-bantam
BANTAM
GAGAUCA
None
MIMAT0012679
DS612599
38790
38850
-
I. scapularis
Protostomia
No
Lpo-Bantam-P10
None
BANTAM
GAGAUCA
None
None
NW_013668390.1
57984
58044
-
L. polyphemus
Protostomia
No
1
Lpo-Bantam-P11
None
BANTAM
GAGAUCA
None
None
NW_013666657.1
258431
258491
-
L. polyphemus
Protostomia
No
1
Lpo-Bantam-P12
None
BANTAM
GAGAUCA
None
None
NW_013667299.1
126779
126839
+
L. polyphemus
Protostomia
No
Lpo-Bantam-P13
None
BANTAM
GAGAUCA
None
None
NW_013670185.1
24874
24934
-
L. polyphemus
Protostomia
No
Lpo-Bantam-P14
None
BANTAM
GAGAUCA
None
None
NW_013670945.1
64919
64979
+
L. polyphemus
Protostomia
No
Lpo-Bantam-P15
None
BANTAM
GAGAUCA
None
None
NW_013674997.1
13900
13959
-
L. polyphemus
Protostomia
No
Csc-Bantam-P16
None
BANTAM
GAGAUCA
None
None
NW_019385956.1
96869
96929
-
C. sculpturatus
Protostomia
Unknown
Csc-Bantam-P17
None
BANTAM
GAGAUCA
None
None
NW_019384376.1
788122
788182
-
C. sculpturatus
Protostomia
Unknown
Sme-Bantam-P18
sme-bantam-a
BANTAM
GAGAUCA
None
MIMAT0003949
NNSW01000048_dd_Smes_g4_48
1523214
1523273
-
S. mediterranea
Protostomia
No
1
Sme-Bantam-P19
sme-bantam-b
BANTAM
GAGAUCA
MIMAT0012085
MIMAT0003950
NNSW01000024_dd_Smes_g4_24
5777402
5777455
+
S. mediterranea
Protostomia
No
Sme-Bantam-P20
sme-bantam-c-1
BANTAM
GAGAUCA
MIMAT0012086
MIMAT0003951
NNSW01000102_dd_Smes_g4_102
1106013
1106065
-
S. mediterranea
Protostomia
No
1
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