| MirGeneDB ID | Sha-Mir-7392-P1 |
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| Family name |
MIR-7392 (all species) |
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| Seed |
ACGAGUA |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
Sha-Mir-7392-P2
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| Orthologues |
Mdo-Mir-7392-P1a
Mdo-Mir-7392-P1b
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL867604.1: 507292-507347 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCUCAAGUAUCAGAAGUGAGAUGCCCUGGGUACGAGUAUACCAUGGUUACCUGAGUGUAUUUUGGUAACCUCAGGAUACUCGUUCCUGGUGUAUACUUCUUUGUCCACUUACAACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CCUCAAGUAUCAGAAGU- -| C UG U A AU- UGAGU
GAG AUGC C GG ACGAGUAU CC GGUUACC G
UUC UAUG G CC UGCUCAUA GG CCAAUGG U
ACAACAUUCACCUGUUUC A^ U GU U - ACU UUUUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-7392-P1_5p |
| mirBase accession | None |
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| Sequence |
0- UACGAGUAUACCAUGGUUACC -21
Get sequence
|
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| Star sequence |
Sha-Mir-7392-P1_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- UAACCUCAGGAUACUCGUUCC -56
Get sequence
|
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