| MirGeneDB ID | Obi-Novel-80 |
|---|
| Family name |
OCT-NOVEL-80 (all species) |
|---|
| Seed |
GUGUCCC |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Ovu-Novel-80
|
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| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ417620: 1197817-1197885 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUCUACAGCCGUUACCGAAUCGCAGAGGAAAGUUGGAUUUGUGGAGGCACAUUUUCAGUCUCACCAAACAACAGUUAUGUGUCCCACGGUUCCAACUCUCAGUUGUCGAUAUUAACUUAAAGCAUCAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUCUACAGCCGUUACCGA- -| AG A U A UUUCAGUCUCA
AUCG CAG GA AGUUGGA UUGUGG GGCACAU C
UAGC GUU CU UCAACCU GGCACC CUGUGUA C
UGACUACGAAAUUCAAUUA U^ GA C U - UUGACAACAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Obi-Novel-80_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGUUGGAUUUGUGGAGGCACAUU -23
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-80_3p |
| mirBase accession | None |
|---|
| Sequence |
47- UGUGUCCCACGGUUCCAACUCU -69
Get sequence
|
|---|
