| MirGeneDB ID | Obi-Novel-71-v2 |
|---|
| Family name |
OCT-NOVEL-71 (all species) |
|---|
| Seed |
UCUGAGU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-71-v1
|
|---|
| Orthologues |
Ovu-Novel-71-v2
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ426666: 108507-108564 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUCCAAAGGUAUAGUUUACCGUAAAAAUGUUUCUGAGUUCCUCAGUCAGUGAAAUAUGCCAAUGCACUGAUUGGAGAAGGCAGAAAACAUUAUUAUGGAAUUUUGACGUAAACCAACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCCAAAGGUAUAGUUUA-- A -| AG CU AAAUAU
CCGUAA AAUG UUUCUG UUC CAGUCAGUG \
GGUAUU UUAC AAAGAC AAG GUUAGUCAC G
UCAACCAAAUGCAGUUUUAA A A^ GG AG GUAACC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-71-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUCUGAGUUCCUCAGUCAGUG -21
Get sequence
|
|---|
| Star sequence |
Obi-Novel-71-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- ACUGAUUGGAGAAGGCAGAAAAC -58
Get sequence
|
|---|
