MirGeneDB ID | Hsa-Novel-2 |
Family name |
CAT-NOVEL-2 (all species) |
Seed |
AUAAACU |
Species |
Human (Homo sapiens) |
MiRBase ID |
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Paralogues |
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Orthologues |
Mml-Novel-2
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Node of Origin (locus) |
Catarrhini
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Node of Origin (family) |
Catarrhini
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Genome context (hg38) |
chr4: 75973882-75973940 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
GGCAUGCAGUUAGAAGUAAGCAUCACUCAGCAUAAACUGCAUGCCUGCACACCAGGCAUGCAGUGAUGUGCAGGCAUGCAGUUUAUGUUAAGUGAUGCUUUCUUUGUUCCUAUACUGCU
Get precursor sequence
|
Structure | 10 20 30 40 50
GGCAUGCAGUUAGAAGU--| C C AGGCA
AAGCAUCACU AGCAUAAACUGCAUGCCUGCACA C \
UUCGUAGUGA UUGUAUUUGACGUACGGACGUGU G U
UCGUCAUAUCCUUGUUUCU^ A A UGACG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | No |
Tissue expression
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Ad |
Ar |
Bl |
Bo |
Bo |
Bo |
Bo |
Bo |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Br |
Es |
Ga |
He |
He |
He |
He |
He |
Ki |
Li |
Lu |
Ly |
Mu |
Ne |
Pa |
Pl |
Pl |
Sk |
Sp |
Sp |
St |
Su |
Te |
Th |
To |
Tr |
Ve |
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Mature sequence |
Hsa-Novel-2_5p |
mirBase accession | None |
Sequence |
0- CAUAAACUGCAUGCCUGCACACC -23
Get sequence
|
Co-mature sequence |
Hsa-Novel-2_3p |
mirBase accession | None |
Sequence |
36- UGUGCAGGCAUGCAGUUUAUGUU -59
Get sequence
|