MirGeneDB ID | Rno-Mir-450-P1a |
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Family name | MIR-450 (all species) |
Seed | UUUGCGA |
Species | Norway rat (Rattus norvegicus) |
MiRBase ID | rno-mir-450b-1 |
Paralogues | Rno-Mir-450-P1b Rno-Mir-450-P2a Rno-Mir-450-P2b Rno-Mir-450-P3a Rno-Mir-450-P3b |
Orthologues | Bta-Mir-450-P1 Cfa-Mir-450-P1 Cpo-Mir-450-P1 Dno-Mir-450-P1 Hsa-Mir-450-P1 Mml-Mir-450-P1 Mmu-Mir-450-P1 Ocu-Mir-450-P1 |
Node of Origin (locus) | R. norvegicus |
Node of Origin (family) | Eutheria |
Genome context (rn6) |
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Precursor (pre-Mir +30nt flank) | UUUUGCGAUGUGUUCCUAAUAUGUACUAUGAGUGUAUUGGGGACGCUUCGCAUUCAUGet precursor sequence |
Structure | 10 20 UUU--| U UG ACU UGCGA GUGUUCCUAAUA U \ ACGCU CGCAGGGGUUAU G A UACUU^ U GU AGU 50 40 30 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Rno-Mir-450-P1a_5p |
mirBase accession | MIMAT0035746 |
Sequence |
0- UUUUGCGAUGUGUUCCUAAUA -21
Get sequence
|
Star sequence | Rno-Mir-450-P1a_3p* |
mirBase accession | MIMAT0035747 |
Sequence |
35- AUUGGGGACGCUUCGCAUUCAU -57
Get sequence
|