Mir-450-P1

MirGeneDB ID

Hsa-Mir-450-P1

Family name

MIR-450 (all species)

Seed

UUUGCGA

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-450a-2

Paralogues

Hsa-Mir-450-P2 Hsa-Mir-450-P3

Orthologues

Bta-Mir-450-P1 Cfa-Mir-450-P1 Cpo-Mir-450-P1 Dno-Mir-450-P1 Mml-Mir-450-P1 Mmu-Mir-450-P1 Ocu-Mir-450-P1 Rno-Mir-450-P1a Rno-Mir-450-P1b

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 134540529-134540585 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-450-P1)

Mir-450-P3 chrX: 134540195-134540252 [-] UCSC Ensembl
Mir-450-P2 chrX: 134540358-134540414 [-] UCSC Ensembl
Mir-450-P1 chrX: 134540529-134540585 [-] UCSC Ensembl
Mir-542-v1 chrX: 134541364-134541422 [-] UCSC Ensembl
Mir-542-v2 chrX: 134541365-134541421 [-] UCSC Ensembl
Mir-15-P2c chrX: 134546331-134546393 [-] UCSC Ensembl
Mir-15-P1c chrX: 134546643-134546701 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AAAGGUGACCAAAGAAAGAUGCUAAACUAUUUUUGCGAUGUGUUCCUAAUAUGUAAUAUAAAUGUAUUGGGGACAUUUUGCAUUCAUAGUUUUGUAUCAAUAAUAUGGGGAAAAGAG

Get precursor sequence

Structure

        10          20        30        40        50        
AAAGGUGACCAAAGAAA--|    U       UUU     U             GUAAU 
                   GAUGC AAACUAU   UGCGA GUGUUCCUAAUAU     \
                   CUAUG UUUGAUA   ACGUU UACAGGGGUUAUG     A
GAGAAAAGGGGUAUAAUAA^    U       CUU     U             UAAAU 
     110       100        90        80        70        60

Deep sequencing

Go to detailed chart

Comment

There is a second Dicer cut - 1 on both arms.

3' NTU

Motifs

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Mature sequence

Hsa-Mir-450-P1_5p

mirBase accession

MIMAT0001545

Sequence

0- UUUUGCGAUGUGUUCCUAAUAU -22

Get sequence

Proposed targets

microrna.org: MIMAT0001545
TargetScanVert: hsa-miR-450a-5p
TargetMiner: hsa-miR-450a-5p
miRDB: MIMAT0001545

Star sequence

Hsa-Mir-450-P1_3p*

mirBase accession

MIMAT0031074

Sequence

35- AUUGGGGACAUUUUGCAUUCAU -57

Get sequence

Proposed targets

TargetScanVert: hsa-miR-450a-2-3p
miRDB: MIMAT0031074