MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-450-P1

Family name MIR-450 (all species)
Seed UUUGUGA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-450c
Paralogues Dno-Mir-450-P2  Dno-Mir-450-P3 
Orthologues Bta-Mir-450-P1  Cfa-Mir-450-P1  Cpo-Mir-450-P1  Hsa-Mir-450-P1  Mml-Mir-450-P1  Mmu-Mir-450-P1  Ocu-Mir-450-P1  Rno-Mir-450-P1a  Rno-Mir-450-P1b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH573198: 468836-468892 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P1)
Mir-15-P1c JH573198: 462451-462509 [+] UCSC Ensembl
Mir-15-P2c JH573198: 462819-462881 [+] UCSC Ensembl
Mir-542-v1 JH573198: 468016-468075 [+] UCSC Ensembl
Mir-542-v2 JH573198: 468017-468074 [+] UCSC Ensembl
Mir-450-P1 JH573198: 468836-468892 [+] UCSC Ensembl
Mir-450-P2 JH573198: 468989-469045 [+] UCSC Ensembl
Mir-450-P3 JH573198: 469158-469215 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGAGGGACCAAAGAAUGAUGCAAAACUAUUUUUGUGAUGUGUUCCUAAUAUGAAAUAUAAGUGUAUUGGGAAUAUUUUGCAUCCAUGGUUUUGUAUCAAUAAGUGGAAAAAAUAAA
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Structure
        10          20        30        40        50        
AUGAGGGACCAAAGAAU--|            UUU  UG U             GAAAU 
                   GAUGCAAAACUAU   UG  A GUGUUCCUAAUAU     \
                   CUAUGUUUUGGUA   AC  U UAUAAGGGUUAUG     A
AAAUAAAAAAGGUGAAUAA^            CCU  GU U             UGAAU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
 +
To
Mature sequence

Dno-Mir-450-P1_5p

mirBase accessionMIMAT0047901
Sequence
0- UUUUGUGAUGUGUUCCUAAUAU -22
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Star sequence

Dno-Mir-450-P1_3p* (predicted)

mirBase accessionMIMAT0047902
Sequence
35- AUUGGGAAUAUUUUGCAUCCAU -57
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