MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-192-P1 
Orthologues Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Dre-Mir-192-P2b  Gja-Mir-192-P2  Gmo-Mir-192-P2b  Hsa-Mir-192-P2  Loc-Mir-192-P2  Mal-Mir-192-P2b  Mml-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Ocu-Mir-192-P2  Rno-Mir-192-P2  Sha-Mir-192-P2  Spt-Mir-192-P2  Tni-Mir-192-P2b-v1  Tni-Mir-192-P2b-v2  Xla-Mir-192-P2c  Xla-Mir-192-P2d  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(echTel2)
JH980369: 3027789-3027853 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCAGGCUGCCCAGACCGAGUGCACAAGUCUCUGACCUAUGAAUUGACAGCCAGUGCCUUGGGCUCCCCUCUGGCUGCCAAUACCAUAGGUCACAGGUAUGUUUGCCUCCAUGCCAGCCGCCGGGA
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Structure
        10         20          30        40         50        60 
GCAGGCUGCCCAGACCG-  U  --   AG   C         A-|   A     AGUGCCUUG 
                  AG GC  ACA  UCU UGACCUAUG  AUUG CAGCC         G
                  UC CG  UGU  GGA ACUGGAUAC  UAAC GUCGG         G
AGGGCCGCCGACCGUACC  -  UU   AU   C         CA^   C     UCUCCCCUC 
   120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Ete-Mir-192-P2_5p

mirBase accessionNone
Sequence
0- CUGACCUAUGAAUUGACAGCC -21
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Star sequence

Ete-Mir-192-P2_3p*

mirBase accessionNone
Sequence
43- CUGCCAAUACCAUAGGUCACAG -65
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