| MirGeneDB ID | Ovu-Novel-6 |
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| Family name |
CEP-NOVEL-6 (all species) |
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| Seed |
GAACCAU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Esc-Novel-6
Npo-Novel-6
Obi-Novel-6
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01012212.1: 3751-3810 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCAGUGGCCGGAUAACAGCCAUCAUGUGGUGAACCAUGGUUAAUGAACAUUGAUUACUUACUUUCCAAUGGUCUUGACCAUGAUUUACCUUAUGAGAGUAAAACUGAUCUCACGACAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUCAGUGGCCGGAUAACA--| CA U C U A AUUACU
GC UCAUG GGUGAA CAUGGUUAA GA CAUUG \
UG AGUAU CCAUUU GUACCAGUU CU GUAAC U
AAACAGCACUCUAGUCAAAA^ AG U A - G CUUUCA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-6_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGAACCAUGGUUAAUGAACAUUG -23
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-6_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AUGGUCUUGACCAUGAUUUACC -60
Get sequence
|
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