MirGeneDB 2.1

82 microRNA genes with node of origin Cephalopoda
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Npo-Mir-2-o20 None MIR-2 CACAGCC None None JACATO010000013.1 409573 409633 + Cephalopoda Protostomia Unknown 1
Esc-Mir-2-o20-v1 None MIR-2 CACAGCC None None Esc-Mir-2-o20-v1_pre_SRIE01000454.1:381798-382057 101 160 + Cephalopoda Protostomia No 1
Obi-Mir-2-o20-v1 None MIR-2 CACAGCC None None KQ419829 51363 51423 - Cephalopoda Protostomia No 1
Ovu-Mir-2-o20-v1 None MIR-2 CACAGCC None None RXHP01057295.1 23280 23340 - Cephalopoda Protostomia No 1
Esc-Mir-2-o20-v2 None MIR-2 AUCACAG None None Esc-Mir-2-o20-v1_pre_SRIE01000454.1:381798-382057 101 159 + Cephalopoda Protostomia No 1
Obi-Mir-2-o20-v2 None MIR-2 AUCACAG None None KQ419829 51363 51423 - Cephalopoda Protostomia No 1
Ovu-Mir-2-o20-v2 None MIR-2 AUCACAG None None RXHP01057295.1 23280 23340 - Cephalopoda Protostomia No 1
Esc-Mir-2-o21 None MIR-2 CACAGCC None None Esc-Mir-2-o21_pre_SRIE01000454.1:381988-382249 101 162 + Cephalopoda Protostomia No 1
Npo-Mir-2-o21 None MIR-2 AUCACAG None None JACATO010000013.1 409697 409758 + Cephalopoda Protostomia Unknown 1
Obi-Mir-2-o21 None MIR-2 AUCACAG None None KQ419829 51162 51227 - Cephalopoda Protostomia No 1 1
Ovu-Mir-2-o21 None MIR-2 AUCACAG None None RXHP01057295.1 23087 23152 - Cephalopoda Protostomia No 1 1
Npo-Mir-2-o23 None MIR-2 CACAGCC None None JACATO010000013.1 410351 410408 + Cephalopoda Protostomia Unknown 1 1
Obi-Mir-2-o23 None MIR-2 CACAGCC None None KQ419829 49652 49710 - Cephalopoda Protostomia No 1 1
Esc-Mir-2-o23-v1 None MIR-2 CACAGCC None None Esc-Mir-2-o23-v1_pre_SRIE01000454.1:384530-384793 101 164 + Cephalopoda Protostomia No 1 1
Ovu-Mir-2-o23-v1 None MIR-2 CACAGCC None None RXHP01057295.1 21562 21620 - Cephalopoda Protostomia No 1 1
Esc-Mir-2-o23-v2 None MIR-2 AUCACAG None None Esc-Mir-2-o23-v1_pre_SRIE01000454.1:384530-384793 101 164 + Cephalopoda Protostomia No 1
Ovu-Mir-2-o23-v2 None MIR-2 AUCACAG None None RXHP01057295.1 21562 21620 - Cephalopoda Protostomia No 1
Esc-Mir-2-o24 None MIR-2 CAUCAAA None None Esc-Mir-2-o24_pre_SRIE01000454.1:384633-384896 101 164 + Cephalopoda Protostomia No
Npo-Mir-2-o24 None MIR-2 CAUCAAA None None JACATO010000013.1 410469 410530 + Cephalopoda Protostomia Unknown
Obi-Mir-2-o24 None MIR-2 CAUCAAA None None KQ419829 49553 49612 - Cephalopoda Protostomia No
Ovu-Mir-2-o24 None MIR-2 CAUCAAA None None RXHP01057295.1 21463 21522 - Cephalopoda Protostomia No
Npo-Mir-216-P2j None MIR-216 AAUCUCA None None JACATO010001670.1 36790 36848 - Cephalopoda Bilateria Unknown 1 1
Obi-Mir-216-P2j None MIR-216 AAUCUCA None None KQ415847 307656 307715 - Cephalopoda Bilateria Unknown 1 1
Ovu-Mir-216-P2j None MIR-216 AAUCUCA None None RXHP01022029.1 191981 192040 - Cephalopoda Bilateria No 1 1
Esc-Mir-216-P2k None MIR-216 AAUCUCA None None Esc-Mir-216-P2_pre_SRIE01006986.1:177112-177371 101 160 + Cephalopoda Bilateria No 1
Npo-Mir-216-P2k None MIR-216 AAUCUCA None None JACATO010001670.1 35814 35871 - Cephalopoda Bilateria Unknown 1 1
Obi-Mir-216-P2k None MIR-216 AAUCUCA None None KQ415847 304811 304870 - Cephalopoda Bilateria No 1
Ovu-Mir-216-P2k None MIR-216 AAUCUCA None None RXHP01022029.1 185931 185990 - Cephalopoda Bilateria No 1
Esc-Novel-1 None CEP-NOVEL-1 GGGGAUG None None Esc-Novel-1_pre_SRIE01008808.1:1274484-1274624 41 101 - Cephalopoda Cephalopoda No
Npo-Novel-1 None CEP-NOVEL-1 GGGGAUG None None JACATO010000106.1 248968 249029 - Cephalopoda Cephalopoda Unknown
Obi-Novel-1 None CEP-NOVEL-1 GGGGAUG None None KQ417540 703817 703877 - Cephalopoda Cephalopoda No 1
Ovu-Novel-1 None CEP-NOVEL-1 GGGGAUG None None RXHP01016389.1 512059 512119 - Cephalopoda Cephalopoda No 1
Esc-Novel-2 None CEP-NOVEL-2 ACACCCG None None Esc-Novel-2_pre_SRIE01024612.1:268348-268606 101 159 + Cephalopoda Cephalopoda Unknown
Npo-Novel-2 None CEP-NOVEL-2 ACACCCG None None JACATO010000674.1 15031 15089 - Cephalopoda Cephalopoda Unknown
Obi-Novel-2 None CEP-NOVEL-2 ACACCCG None None KQ432306 5515 5573 + Cephalopoda Cephalopoda No
Ovu-Novel-2 None CEP-NOVEL-2 ACACCCG None None RXHP01011115.1 158 216 + Cephalopoda Cephalopoda No
Npo-Novel-3 None CEP-NOVEL-3 UGUCGGC None None JACATO010000115.1 633204 633265 - Cephalopoda Cephalopoda Unknown 1
Esc-Novel-3-v1 None CEP-NOVEL-3 UGUCGGC None None Esc-Novel-3-v1_pre_SRIE01057543.1:1523608-1523868 101 161 + Cephalopoda Cephalopoda No 1
Obi-Novel-3-v1 None CEP-NOVEL-3 UGUCGGC None None KQ418486 141081 141141 + Cephalopoda Cephalopoda No 1
Ovu-Novel-3-v1 None CEP-NOVEL-3 UGUCGGC None None RXHP01019472.1 106418 106478 + Cephalopoda Cephalopoda No 1
Esc-Novel-3-v2 None CEP-NOVEL-3 GUCGGCU None None Esc-Novel-3-v1_pre_SRIE01057543.1:1523608-1523868 101 161 + Cephalopoda Cephalopoda No 1
Obi-Novel-3-v2 None CEP-NOVEL-3 GUCGGCU None None KQ418486 141081 141141 + Cephalopoda Cephalopoda No 1
Ovu-Novel-3-v2 None CEP-NOVEL-3 GUCGGCU None None RXHP01019472.1 106418 106478 + Cephalopoda Cephalopoda No 1
Esc-Novel-3-v3 None CEP-NOVEL-3 UCGGCUG None None Esc-Novel-3-v1_pre_SRIE01057543.1:1523608-1523868 101 161 + Cephalopoda Cephalopoda No 1
Obi-Novel-3-v3 None CEP-NOVEL-3 UCGGCUG None None KQ418486 141081 141141 + Cephalopoda Cephalopoda No 1
Ovu-Novel-3-v3 None CEP-NOVEL-3 UCGGCUG None None RXHP01019472.1 106418 106478 + Cephalopoda Cephalopoda No 1
Esc-Novel-4 None CEP-NOVEL-4 CGGUCAU None None Esc-Novel-4_pre_SRIE01029538.1:715110-715367 101 158 + Cephalopoda Cephalopoda No 1
Npo-Novel-4 None CEP-NOVEL-4 CGGUCAU None None JACATO010000106.1 1204687 1204744 + Cephalopoda Cephalopoda Unknown 1
Obi-Novel-4 None CEP-NOVEL-4 CGGUCAU None None KQ417152 826222 826279 - Cephalopoda Cephalopoda No 1
Ovu-Novel-4 None CEP-NOVEL-4 CGGUCAU None None RXHP01019681.1 310692 310749 - Cephalopoda Cephalopoda No 1
Esc-Novel-5 None CEP-NOVEL-5 GUUCCUA None None Esc-Novel-5_pre_SRIE01025906.1:3068666-3068925 101 160 + Cephalopoda Cephalopoda No 1
Npo-Novel-5 None CEP-NOVEL-5 GUUCCUG None None JACATO010000113.1 605057 605116 - Cephalopoda Cephalopoda Unknown
Obi-Novel-5 None CEP-NOVEL-5 GUUCCUA None None KQ418263 1045148 1045207 - Cephalopoda Cephalopoda No 1
Ovu-Novel-5 None CEP-NOVEL-5 GUUCCUA None None RXHP01019738.1 354 413 - Cephalopoda Cephalopoda No 1
Esc-Novel-6 None CEP-NOVEL-6 GAACCAU None None Esc-Novel-6_pre_SRIE01001855.1:532689-532829 41 101 - Cephalopoda Cephalopoda No
Npo-Novel-6 None CEP-NOVEL-6 GAACCAU None None JACATO010000303.1 1527089 1527147 - Cephalopoda Cephalopoda Unknown
Obi-Novel-6 None CEP-NOVEL-6 GAACCAU None None KQ421281 361550 361609 + Cephalopoda Cephalopoda No
Ovu-Novel-6 None CEP-NOVEL-6 GAACCAU None None RXHP01012212.1 3751 3810 - Cephalopoda Cephalopoda No
Esc-Novel-7 None CEP-NOVEL-7 UUGCUAU None None Esc-Novel-7_pre_SRIE01045851.1:1003677-1003935 101 159 + Cephalopoda Cephalopoda No 1
Npo-Novel-7 None CEP-NOVEL-7 UUGCUAU None None JACATO010002266.1 27541 27599 + Cephalopoda Cephalopoda Unknown 1
Obi-Novel-7 None CEP-NOVEL-7 UUGCUAU None None KQ419514 492759 492817 + Cephalopoda Cephalopoda No 1
Ovu-Novel-7 None CEP-NOVEL-7 UUGCUAU None None RXHP01022633.1 305260 305318 + Cephalopoda Cephalopoda No 1
Esc-Novel-8 None CEP-NOVEL-8 GGAACAU None None Esc-Novel-8_pre_SRIE01019391.1:11446582-11446725 44 101 - Cephalopoda Cephalopoda No 1
Npo-Novel-8 None CEP-NOVEL-8 GGAACAU None None JACATO010001118.1 124861 124918 + Cephalopoda Cephalopoda Unknown 1
Obi-Novel-8 None CEP-NOVEL-8 GGAACAU None None KQ421854 392298 392355 + Cephalopoda Cephalopoda No 1
Ovu-Novel-8 None CEP-NOVEL-8 GGAACAU None None RXHP01025595.1 233020 233077 + Cephalopoda Cephalopoda No 1 1
Npo-Novel-9 None CEP-NOVEL-9 AGGAUCU None None JACATO010000920.1 279226 279289 - Cephalopoda Cephalopoda Unknown 1
Obi-Novel-9-v1 None CEP-NOVEL-9 AGGAUCU None None KQ418355 389258 389321 - Cephalopoda Cephalopoda No 1
Ovu-Novel-9-v1 None CEP-NOVEL-9 AGGAUCU None None RXHP01074648.1 88005 88068 - Cephalopoda Cephalopoda No 1
Obi-Novel-9-v2 None CEP-NOVEL-9 GGAUCUU None None KQ418355 389258 389321 - Cephalopoda Cephalopoda No 1
Ovu-Novel-9-v2 None CEP-NOVEL-9 GGAUCUU None None RXHP01074648.1 88005 88068 - Cephalopoda Cephalopoda No 1
Esc-Novel-10 None CEP-NOVEL-10 UGGCGGA None None Esc-Novel-10_pre_SRIE01013658.1:1033644-1033784 41 101 - Cephalopoda Cephalopoda No
Npo-Novel-10 None CEP-NOVEL-10 UGGGGGA None None JACATO010000938.1 295052 295110 + Cephalopoda Cephalopoda Unknown
Obi-Novel-10 None CEP-NOVEL-10 UGGCGGA None None KQ428200 264164 264224 + Cephalopoda Cephalopoda No
Ovu-Novel-10 None CEP-NOVEL-10 UGGCGGA None None RXHP01062601.1 247990 248050 + Cephalopoda Cephalopoda No
Npo-Novel-11 None CEP-NOVEL-11 GGUUUUG None None JACATO010002112.1 168366 168426 + Cephalopoda Cephalopoda Unknown
Obi-Novel-11 None CEP-NOVEL-11 GGUUUUG None None KQ419141 196735 196794 + Cephalopoda Cephalopoda No 1 1
Ovu-Novel-11 None CEP-NOVEL-11 GGUUUUG None None RXHP01076294.1 178113 178172 + Cephalopoda Cephalopoda No 1 1
Esc-Novel-12 None CEP-NOVEL-12 UUGGCAU None None Esc-Novel-12_pre_SRIE01012209.1:245987-246131 45 101 - Cephalopoda Cephalopoda No
Npo-Novel-12 None CEP-NOVEL-12 UUGGCAU None None JACATO010000392.1 79417 79473 - Cephalopoda Cephalopoda Unknown 1 1 1
Obi-Novel-12 None CEP-NOVEL-12 UUGGCAU None None KQ416270 137472 137529 + Cephalopoda Cephalopoda No
Ovu-Novel-12 None CEP-NOVEL-12 UUGGCAU None None RXHP01047956.1 61366 61423 + Cephalopoda Cephalopoda No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all