MirGeneDB ID | Ovu-Mir-137-v1 |
Family name |
MIR-137 (all species) |
Seed |
UAUUGCU |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
|
Paralogues |
Ovu-Mir-137-v2
|
Orthologues |
Asu-Mir-137
Bfl-Mir-137
Cbr-Mir-137
Cel-Mir-137
Cgi-Mir-137
Cte-Mir-137
Dan-Mir-137
Dma-Mir-137
Dme-Mir-137
Dmo-Mir-137
Dpu-Mir-137
Dsi-Mir-137
Dya-Mir-137
Ebu-Mir-137
Esc-Mir-137
Hme-Mir-137
Isc-Mir-137
Lan-Mir-137
Lgi-Mir-137
Obi-Mir-137
Pfl-Mir-137-v1
Pmi-Mir-137-v1
Sko-Mir-137
Spu-Mir-137
Tca-Mir-137-v1
Xbo-Mir-137
|
Node of Origin (locus) |
Bilateria
|
Node of Origin (family) |
Bilateria
|
Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01002239.1: 63693-63752 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCACAGAGAAGCGAAAGAGCCGCGUUGACAACGGGUAUUCUUAGGUUAAUAAUACCAGACAGAGUUGUUAUUGCUUGAGAAUACACGUAAUCGACUGGUCUCUCCAAACAGCACAAAUCU
Get precursor sequence
|
Structure | 10 20 30 40 50
CCACAGAGAAGCGAAAGA---| C CA G U ACCAGA
GCCG GUUGA ACG GUAUUCUUAGGU AAUAAU \
UGGU CAGCU UGC CAUAAGAGUUCG UUAUUG C
UCUAAACACGACAAACCUCUC^ - AA A - UUGAGA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Star sequence |
Ovu-Mir-137-v1_5p* |
mirBase accession | None |
Sequence |
0- ACGGGUAUUCUUAGGUUAAUAAU -23
Get sequence
|
Mature sequence |
Ovu-Mir-137-v1_3p |
mirBase accession | None |
Sequence |
37- UUAUUGCUUGAGAAUACACGUAA -60
Get sequence
|