MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-105-P1

Family name MIR-105 (all species)
Seed CAAAUGC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-105a-2
Paralogues Ocu-Mir-105-P2 
Orthologues Bta-Mir-105-P1  Cfa-Mir-105-P1  Cpo-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mml-Mir-105-P1  Mmu-Mir-105-P1  Rno-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrUn0033: 388180-388238 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-105-P1)		 Mir-105-P1 chrUn0033: 388180-388238 [+] UCSC Ensembl
Mir-105-P2 chrUn0033: 390331-390389 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUGCAGGAACUUAUGUGUGUGCAUCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGCUUAUGCACCACGGAUGUUUGAGCAUGUGCUAUGGUGUCUACUUUUGCAACAUUGCCAUCU
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Structure
        10          20        30        40        50         
GUUGCAGGAACUUAUGU--|  U         U  A          UC        GCUG 
                   GUG GCAUCGUGG CA AUGCUCAGAC  CUGUGGUG    C
                   CAU UGUGGUAUC GU UACGAGUUUG  GGCACCAC    U
UCUACCGUUACAACGUUUU^  C         -  G          UA        GUAU 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-105-P1_5p
mirBase accessionMIMAT0048192
Sequence 
0- UCAAAUGCUCAGACUCCUGUGGUG -24
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Star sequence

Ocu-Mir-105-P1_3p*
mirBase accessionMIMAT0048194
Sequence 
36- CCACGGAUGUUUGAGCAUGUGCU -59
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