MirGeneDB ID | Mun-Let-7-P2c4 |
---|---|
Family name | LET-7 (all species) |
Seed | GAGGUAG |
Species | Microcaecilia (Microcaecilia unicolor) |
MiRBase ID | |
Paralogues | Mun-Let-7-P1b Mun-Let-7-P1c Mun-Let-7-P1d Mun-Let-7-P2a1 Mun-Let-7-P2a2 Mun-Let-7-P2a3 Mun-Let-7-P2a4 Mun-Let-7-P2b1 Mun-Let-7-P2b2 Mun-Let-7-P2b3 Mun-Let-7-P2b4 Mun-Let-7-P2c1 Mun-Let-7-P2c2 Mun-Let-7-P2c3 |
Orthologues | Aae-Let-7 Bge-Let-7 Bpl-Let-7 Cgi-Let-7 Cmi-Let-7-P2c4 Cte-Let-7 Dan-Let-7 Dma-Let-7 Dme-Let-7 Dmo-Let-7 Dpu-Let-7 Dsi-Let-7 Dya-Let-7 Esc-Let-7 Hme-Let-7 Isc-Let-7 Lan-Let-7 Lch-Let-7-P2c4 Lgi-Let-7 Npo-Let-7 Obi-Let-7 Ovu-Let-7 Pfl-Let-7 Pmi-Let-7 Sko-Let-7 Spu-Let-7 Tca-Let-7 Xbo-Let-7 Xla-Let-7-P2c4 Xtr-Let-7-P2c4 |
Node of Origin (locus) | Gnathostomata |
Node of Origin (family) | Bilateria |
Genome context (Mun_miRNA_loci) |
Let-7-P2c4_NW_021962894.1:18002-18130: 29-101 [-] |
Precursor (pre-Mir +30nt flank) | UGAGGUAGUGGUUUGUGUAGUUAGGGGCAGUAAUGUUGCCCAUCGGAGAUAACUAUGCAAUCUACUGCCUUGCGet precursor sequence |
Structure | 10 20 30 U- U G-------| UA GAGGUAGUGG UUGUGUAGUUA GGGCAG \ UUCCGUCAUC AACGUAUCAAU CCCGUU A CG U AGAGGCUA^ GU 70 60 50 40 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Mature sequence | Mun-Let-7-P2c4_5p (predicted) |
mirBase accession | None |
Sequence |
0- UGAGGUAGUGGUUUGUGUAGUU -22
Get sequence
|
Star sequence | Mun-Let-7-P2c4_3p* (predicted) |
mirBase accession | None |
Sequence |
52- CUAUGCAAUCUACUGCCUUGC -73
Get sequence
|