MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-550-P2b

Family name MIR-550 (all species)
Seed GUCUUAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-550a-2
Paralogues Hsa-Mir-550-P1  Hsa-Mir-550-P2a 
Orthologues Mml-Mir-550-P2 
Node of Origin (locus) H. sapiens
Node of Origin (family) Catarrhini
Genome context
(hg38)		 chr7: 32733002-32733063 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGUAUUUUGAUGCUUUGCUGGCUGGUGCAGUGCCUGAGGGAGUAAGAGCCCUGUUGUUGUCAGAUAGUGUCUUACUCCCUCAGGCACAUCUCCAGCGAGUCUCUUGCUCUCCUCCAAUUU
Get precursor sequence
Structure
        10          20        30        40         50          
CUGGUAUUUUGAUGCUUU--   G     UGCA                  -| CCUGUUGU 
                    GCU GCUGG    GUGCCUGAGGGAGUAAGA GC        \
                    UGA CGACC    CACGGACUCCCUCAUUCU UG        U
UUUAACCUCCUCUCGUUCUC   G     UCUA                  G^ AUAGACUG 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Star sequence

Hsa-Mir-550-P2b_5p*
mirBase accessionMIMAT0004800
Sequence 
0- AGUGCCUGAGGGAGUAAGAGCCC -23
Get sequence
Proposed targets microrna.org: MIMAT0004800
TargetScanVert: hsa-miR-550a-5p
TargetMiner: hsa-miR-550a-5p
miRDB: MIMAT0004800
Mature sequence

Hsa-Mir-550-P2b_3p
mirBase accessionMIMAT0003257
Sequence 
39- UGUCUUACUCCCUCAGGCACAUC -62
Get sequence
Proposed targets microrna.org: MIMAT0003257
TargetScanVert: hsa-miR-550a-3p
TargetMiner: hsa-miR-550a-3p
miRDB: MIMAT0003257