MirGeneDB 2.1
MirGeneDB ID

Hme-Mir-3-P18

Family name MIR-3 (all species)
Seed CACUGGG
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues Hme-Mir-3-P14  Hme-Mir-3-P15  Hme-Mir-3-P16  Hme-Mir-3-P17  Hme-Mir-3-P19  Hme-Mir-3-P20  Hme-Mir-3-P21  Hme-Mir-3-P22  Hme-Mir-3-P23  Hme-Mir-3-P24  Hme-Mir-3-P25  Hme-Mir-3-P26  Hme-Mir-3-P27 
Orthologues Dma-Mir-3  Dpu-Mir-3 
Node of Origin (locus) H. melpomene
Node of Origin (family) Pancrustacea
Genome context
(Hmel_1)		 HE671859: 112729-112787 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUAAAUAAUUAUAUAUUCUAUUAGUCAGAACUGUCAGUCAUUCAGUAUAUAGUGUUUAAGUUCUAUCACUGGGUGUUUGACAGAUCUUGCUGUUAGAUAAAUUAAACGUGCAUUGAC
Get precursor sequence
Structure
        10          20        30        40         50        
AAAUAAAUAAUUAUAUAU--    U    C   A       U        -|  UAGUGU 
                    UCUA UAGU AGA CUGUCAG CAUUCAGU AUA      U
                    AGAU GUCG UCU GACAGUU GUGGGUCA UAU      U
CAGUUACGUGCAAAUUAAAU    U    U   A       U        C^  CUUGAA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-3-P18_5p*
mirBase accessionNone
Sequence 
0- AACUGUCAGUCAUUCAGUAUAUA -23
Get sequence
Mature sequence

Hme-Mir-3-P18_3p
mirBase accessionNone
Sequence 
37- UCACUGGGUGUUUGACAGAUCU -59
Get sequence