MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-724-P2-v1

Family name MIR-724 (all species)
Seed UAAAGGG
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-724
Paralogues Dre-Mir-724-P1-v1  Dre-Mir-724-P1-v2  Dre-Mir-724-P2-v2 
Orthologues Gmo-Mir-724-P2-v1  Gmo-Mir-724-P2-v2  Mal-Mir-724-P2-v1  Mal-Mir-724-P2-v2  Tni-Mir-724-P2-v1  Tni-Mir-724-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Neopterygii
Genome context
(danRer11)		 chr11: 3176699-3176759 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-724-P2-v1)		 Mir-724-P2-v1 chr11: 3176699-3176759 [+] UCSC Ensembl
Mir-724-P2-v2 chr11: 3176700-3176758 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAACAGGCUCGAUUUCCCAGCAGACUGGAUUUAAAGGGAAUUUGCGACUGUUAGUCAGAUUUGUAGAACAGCCACACCUUCCUUUUAAGAUCUUGCCUGCUGCUCUUUCCCCAACGGCCUG
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Structure
        10          20        30         40        50         
CAACAGGCUCGAUUUCC--      ACU     -|        UU  CGA     AGUCAG 
                   CAGCAG   GGAUU UAAAGGGAA  UG   CUGUU      A
                   GUCGUC   UCUAG AUUUUCCUU  AC   GACAA      U
GUCCGGCAACCCCUUUCUC      CGU     A^        CC  ACC     GAUGUU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-724-P2-v1_5p
mirBase accessionMIMAT0003752
Sequence 
0- UUAAAGGGAAUUUGCGACUGUU -22
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Proposed targets TargetScanFish: dre-miR-724
Star sequence

Dre-Mir-724-P2-v1_3p*
mirBase accessionNone
Sequence 
38- CAGCCACACCUUCCUUUUAAGAU -61
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