| MirGeneDB ID | Bta-Mir-3613 |
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| Family name |
MIR-3613 (all species) |
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| Seed |
GUUGUAC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-3613a
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| Paralogues |
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| Orthologues |
Cfa-Mir-3613
Cpo-Mir-3613
Dno-Mir-3613
Ete-Mir-3613
Hsa-Mir-3613
Mdo-Mir-3613
Mml-Mir-3613
Ocu-Mir-3613
Sha-Mir-3613
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| Node of Origin (locus) |
Theria
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| Node of Origin (family) |
Theria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037339.1: 19447849-19447907 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGGCGCACAACGAGAAGGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUGCAUUUUUAGGAACAAAAAAAAAAGCCCAACCCUUCACACCGCUUCAUCUGCAUCUCUCACGAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CGGCGCACAACGAGAAGGUUG--| U UU UA GUUGCA
GGU UGGA GUUG CUUUUUUUUUUGUUC \
CCA ACUU CAAC GAAAAAAAAAACAAG U
CAGCACUCUCUACGUCUACUUCG^ C CC CC GAUUUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-3613_5p |
| mirBase accession | MIMAT0024574 |
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| Sequence |
0- UGUUGUACUUUUUUUUUUGUUC -22
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-3613a
|
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| Star sequence |
Bta-Mir-3613_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACAAAAAAAAAAGCCCAACCCU -59
Get sequence
|
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