| MirGeneDB ID | Sha-Mir-3613 |
|---|
| Family name |
MIR-3613 (all species) |
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| Seed |
GUUGUAC |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-3613
Cfa-Mir-3613
Cpo-Mir-3613
Dno-Mir-3613
Ete-Mir-3613
Hsa-Mir-3613
Mdo-Mir-3613
Mml-Mir-3613
Ocu-Mir-3613
|
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| Node of Origin (locus) |
Theria
|
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| Node of Origin (family) |
Theria
|
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Genome context
(DEVIL_add) |
GL856059.1: 1819-1877 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGGCGGGCUUCGAGACGGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUUUAUUUUUAGGAACAAAAAAAAAAGCCCAACCCUUCACACCGCUUCACCUGCGUCUCUCAAGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGGCGGGCUUCGAGACGGUUG--| U UU UA GUUUUA
GGU UGGA GUUG CUUUUUUUUUUGUUC \
CCA ACUU CAAC GAAAAAAAAAACAAG U
AGGAACUCUCUGCGUCCACUUCG^ C CC CC GAUUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-3613_5p |
| mirBase accession | None |
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| Sequence |
0- UGUUGUACUUUUUUUUUUGUUC -22
Get sequence
|
|---|
| Star sequence |
Sha-Mir-3613_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACAAAAAAAAAAGCCCAACCCU -59
Get sequence
|
|---|
