MirGeneDB

MirGeneDB ID

Asu-Mir-184

Family name MIR-184 (all species)
Seed GGACGGA
Species Large roundworm (Ascaris suum)
MiRBase ID asu-mir-184
Paralogues
Orthologues Aae-Mir-184  Aca-Mir-184  Ami-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cgi-Mir-184-P7  Cgi-Mir-184-P8a  Cgi-Mir-184-P8b  Cgi-Mir-184-P8c  Cgi-Mir-184-P8d  Cgi-Mir-184-P9  Cgi-Mir-184-P10  Cgi-Mir-184-P11  Cgi-Mir-184-P12  Cgi-Mir-184-P13a  Cgi-Mir-184-P13b  Cgi-Mir-184-P14  Cgi-Mir-184-P15a1  Cgi-Mir-184-P15a2  Cgi-Mir-184-P15a3  Cgi-Mir-184-P15a4  Cgi-Mir-184-P15a5  Cgi-Mir-184-P15a6  Cgi-Mir-184-P15a7  Cgi-Mir-184-P15b  Cgi-Mir-184-P15c  Cgi-Mir-184-P15d  Cgi-Mir-184-P15e1  Cgi-Mir-184-P15e2  Cgi-Mir-184-P15e3  Cgi-Mir-184-P15f  Cgi-Mir-184-P15g1  Cgi-Mir-184-P15g2  Cgi-Mir-184-P15g3  Cgi-Mir-184-P15h  Cgi-Mir-184-P15i  Cgi-Mir-184-P15j  Cgi-Mir-184-P15k  Cgi-Mir-184-P15l1  Cgi-Mir-184-P15l2  Cgi-Mir-184-P15m  Cgi-Mir-184-P15n  Cgi-Mir-184-P15o  Cgi-Mir-184-P15p  Cgi-Mir-184-P15q  Cgi-Mir-184-P15r  Cgi-Mir-184-P15s  Cgi-Mir-184-P15t  Cgi-Mir-184-P15u  Cin-Mir-184  Cli-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Cte-Mir-184-P3  Cte-Mir-184-P4  Dan-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Dre-Mir-184-P1  Dre-Mir-184-P2  Efe-Mir-184-o1  Efe-Mir-184-o2  Efe-Mir-184-o3  Efe-Mir-184-o4  Ete-Mir-184  Gga-Mir-184  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Lan-Mir-184  Lgi-Mir-184-P5  Lgi-Mir-184-P6  Mdo-Mir-184  Mml-Mir-184  Mmu-Mir-184  Oan-Mir-184  Ocu-Mir-184  Pfl-Mir-184  Pmi-Mir-184  Rno-Mir-184  Sha-Mir-184  Sko-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Xtr-Mir-184 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(ASU_PRJNA80881_plustraces)
Scaffold34: 66808-66866 [+]
Precursor
(pre-Mir +30nt flank)
UAAUCAGAGCAAUUUUGGGGUGAUUUUGAGUGCUUAUCAGCUGCCAGCCCUGUUGCAACUUGAAACUGGACGGAAGACUGAUAAGAGCCUCAAUUUUGCCCAUUUCGAUGAUAUUGCUC
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Structure
        10         20        30         40         50         
UAAUCAGAGCAAUUUUG-   UG UU     UG-        -| G  AG  CU  UGCAA 
                  GGG  A  UUGAG   CUUAUCAG CU CC  CC  GU     \
                  CCC  U  AACUC   GAAUAGUC GA GG  GG  CA     C
CUCGUUAUAGUAGCUUUA   GU UU     CGA        A^ A  CA  U-  AAGUU 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
0h 11 12 24 46 64 6d 7d 8d 96 Em La Ov Se Sp Te Zy
Star sequence

Asu-Mir-184_5p*

MirBase accessionMIMAT0021501
Sequence
0- UGCUUAUCAGCUGCCAGCCCUGU -23
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Mature sequence

Asu-Mir-184_3p

MirBase accessionMIMAT0021502
Sequence
36- UGGACGGAAGACUGAUAAGAGCC -59
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