MirGeneDB ID | Cbr-Mir-255 |
Family name |
MIR-255 (all species) |
Seed |
UAAGAAA |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-255
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Paralogues |
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Orthologues |
Cel-Mir-255
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Node of Origin (locus) |
Caenorhabditis
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Node of Origin (family) |
Caenorhabditis
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Genome context (CB4) |
V: 11365786-11365844 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
AUAUUUUGUUAGAUGUCUCUUCAUUAUCAGGUAAGAAAUCUUUGUAGUUUUCCGCGAGUCAACGUGAAAACUGAAGAGAUUUUUUACAGAUUCCGGAGGAGCAUCACUUCCAUGGCAAA
Get precursor sequence
|
Structure | 10 20 30 40 50
AUAUUUUGUUAGAUGUC-- AUU-| AG G CGCGAG
UCUUC AUC GUAAGAAAUCUUU UAGUUUUC \
AGGAG UAG CAUUUUUUAGAGA GUCAAAAG U
AAACGGUACCUUCACUACG GCCU^ A- A UGCAAC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | CNNC at 3p(+17) |
Tissue expression
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01 |
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Cb |
Ea |
Ma |
Yo |
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Mature sequence |
Cbr-Mir-255_5p |
mirBase accession | None |
Sequence |
0- GUAAGAAAUCUUUGUAGUUUUC -22
Get sequence
|
Co-mature sequence |
Cbr-Mir-255_3p |
mirBase accession | MIMAT0004297 |
Sequence |
37- AAACUGAAGAGAUUUUUUACAG -59
Get sequence
|