Hsa-Mir-542-v2

reads

mismatches

statistic

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data details

standard experimental all

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References
Tissue	Paper	Accesion
colorectum_hsa_EGAD00001001644	EGAD00001001644	https://www.ncbi.nlm.nih.gov/pubmed/26436952
pancreas_hsa_SRR040800	SRR040800	http://www.ncbi.nlm.nih.gov/pubmed/20507594
liver_hsa_SRR2061807	SRR2061807	http://www.ncbi.nlm.nih.gov/pubmed/26130076
DROSHA-knockout1_hsa_SRR3174962	SRR3174962	http://www.ncbi.nlm.nih.gov/pubmed/26976605
DROSHA-knockout2_hsa_SRR3174963	SRR3174963	http://www.ncbi.nlm.nih.gov/pubmed/26976605
XPO-knockout1_hsa_SRR3174965	SRR3174965	http://www.ncbi.nlm.nih.gov/pubmed/26976605
XPO-knockout2_hsa_SRR3174966	SRR3174966	http://www.ncbi.nlm.nih.gov/pubmed/26976605
DCR-knockout1_hsa_SRR3174967	SRR3174967	http://www.ncbi.nlm.nih.gov/pubmed/26976605
DCR-knockout2_hsa_SRR3174968	SRR3174968	http://www.ncbi.nlm.nih.gov/pubmed/26976605
cell-lines-combined_hsa_SRR5127211	SRR5127211	https://www.ncbi.nlm.nih.gov/pubmed/28877962
spinal-cord_hsa_SRR6853285	SRR6853285	https://www.ncbi.nlm.nih.gov/pubmed/29233923
spleen_hsa_SRR6853286	SRR6853286	https://www.ncbi.nlm.nih.gov/pubmed/29233923
stomach_hsa_SRR6853287	SRR6853287	https://www.ncbi.nlm.nih.gov/pubmed/29233923
testis_hsa_SRR6853288	SRR6853288	https://www.ncbi.nlm.nih.gov/pubmed/29233923
brain_hsa_SRR6853289	SRR6853289	https://www.ncbi.nlm.nih.gov/pubmed/29233923
cerebellum_hsa_SRR6853290	SRR6853290	https://www.ncbi.nlm.nih.gov/pubmed/29233923
kidney_hsa_SRR6853294	SRR6853294	https://www.ncbi.nlm.nih.gov/pubmed/29233923
brain-fetal_hsa_SRR6853295	SRR6853295	https://www.ncbi.nlm.nih.gov/pubmed/29233923
small-intestine_hsa_SRR6853296	SRR6853296	https://www.ncbi.nlm.nih.gov/pubmed/29233923
liver-fetal_hsa_SRR6853297	SRR6853297	https://www.ncbi.nlm.nih.gov/pubmed/29233923
lung_hsa_SRR6853298	SRR6853298	https://www.ncbi.nlm.nih.gov/pubmed/29233923
skeletal-muscle_hsa_SRR6853299	SRR6853299	https://www.ncbi.nlm.nih.gov/pubmed/29233923
placenta_hsa_SRR6853300	SRR6853300	https://www.ncbi.nlm.nih.gov/pubmed/29233923
heart_hsa_SRR6853301	SRR6853301	https://www.ncbi.nlm.nih.gov/pubmed/29233923
thymus_hsa_SRR6853302	SRR6853302	https://www.ncbi.nlm.nih.gov/pubmed/29233923
uterus_hsa_SRR6853303	SRR6853303	https://www.ncbi.nlm.nih.gov/pubmed/29233923
plasma_hsa_SRR6880326-39	SRR6880326	http://www.ncbi.nlm.nih.gov/pubmed/29843592
foreskin_hsa	NA	NA
skin-leg_hsa	NA	NA
skin_hsa_SRR330904	SRR330904	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330905	SRR330905	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330906	SRR330906	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330907	SRR330907	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330908	SRR330908	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330909	SRR330909	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330910	SRR330910	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330911	SRR330911	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330912	SRR330912	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330913	SRR330913	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330914	SRR330914	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330915	SRR330915	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330916	SRR330916	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330917	SRR330917	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330918	SRR330918	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330919	SRR330919	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330920	SRR330920	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330921	SRR330921	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330922	SRR330922	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
skin_hsa_SRR330923	SRR330923	https://www.ncbi.nlm.nih.gov/pubmed/21807764/
leukocytes_hsa_SRR6880332	SRR6880332	http://www.ncbi.nlm.nih.gov/pubmed/29843592
leukocytes_hsa_SRR6880333	SRR6880333	http://www.ncbi.nlm.nih.gov/pubmed/29843592
leukocytes_hsa_SRR6880334	SRR6880334	http://www.ncbi.nlm.nih.gov/pubmed/29843592
leukocytes_hsa_SRR6880335	SRR6880335	http://www.ncbi.nlm.nih.gov/pubmed/29843592
blood_hsa_SRR6880328	SRR6880328	http://www.ncbi.nlm.nih.gov/pubmed/29843592
blood_hsa_SRR6880329	SRR6880329	http://www.ncbi.nlm.nih.gov/pubmed/29843592
blood_hsa_SRR6880330	SRR6880330	http://www.ncbi.nlm.nih.gov/pubmed/29843592
blood_hsa_SRR6880331	SRR6880331	http://www.ncbi.nlm.nih.gov/pubmed/29843592

Hsa-Mir-542-v2

Legend
both truncated	5' elongated	3' elongated	both elongated	5' truncated	3' truncated	canonical
both truncated mismatch	5' elongated mismatch	3' elongated mismatch	both elongated mismatch	5' truncated mismatch	3' truncated mismatch	canonical mismatch

brain-fetal_hsa_SRR6853295

ratio mature/star: 0.0/16.0 = 0.0
ratio mature (mismatch)/star (mismatch): 0.0/0.0 = None

mature (isoform content): None
star (isoform content): 0.0% (homogeneous)

brain-fetal_hsa_SRR6853295

ratio mature/star: 0.0/16.0 = 0.0

Reads

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-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	G	G	G	G	A	U	C	A	U	C	A	U	G	U	C	A	C	G	A	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8	2.81	Hsa-Mir-542-v1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	G	G	G	G	A	U	C	A	U	C	A	U	G	U	C	A	C	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	0.7	Hsa-Mir-542-v1
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C	G	G	U	C	A	A	G	G	A	U	G	C	A	C	A	G	A	U	C	U	C	A	G	A	C	A	U	C	U	C	G	G	G	G	A	U	C	A	U	C	A	U	G	U	C	A	C	G	A	G	A	U	A	C	C	A	G	U	G	U	G	C	A	C	U	U	G	U	G	A	C	A	G	A	U	U	G	A	U	A	A	C	U	G	A	A	A	G	G	U	C	U	G	G	G	A	G	C	C	A	C	U	C	A	U	C	U	U	C	A	U	A	G	C	A	A

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Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	G	G	G	G	A	U	C	A	U	C	A	U	G	U	C	A	C	G	A	G	A	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	8	2.81	Hsa-Mir-542-v1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	G	G	G	G	A	U	C	A	U	C	A	U	G	U	C	A	C	G	A	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	0.7	Hsa-Mir-542-v1
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	U	C	G	G	G	G	A	U	C	A	U	C	A	U	G	U	C	A	C	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2	0.7	Hsa-Mir-542-v1
C	G	G	U	C	A	A	G	G	A	U	G	C	A	C	A	G	A	U	C	U	C	A	G	A	C	A	U	C	U	C	G	G	G	G	A	U	C	A	U	C	A	U	G	U	C	A	C	G	A	G	A	U	A	C	C	A	G	U	G	U	G	C	A	C	U	U	G	U	G	A	C	A	G	A	U	U	G	A	U	A	A	C	U	G	A	A	A	G	G	U	C	U	G	G	G	A	G	C	C	A	C	U	C	A	U	C	U	U	C	A	U	A	G	C	A	A

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