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References
Tissue	Paper	Accesion
late-embryo_cin_SRR014355	SRR014355	https://www.ncbi.nlm.nih.gov/pubmed/19151725
larva_cin_SRR038843	SRR038843	https://www.ncbi.nlm.nih.gov/pubmed/20370911
gastrula_cin_SRR038844	SRR038844	https://www.ncbi.nlm.nih.gov/pubmed/20370911
C-robusta-0-days-immediately-post-amputation1_cin_SRR3953077	SRR3953077	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-0-days-immediately-post-amputation2_cin_SRR3953078	SRR3953078	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-0-days-immediately-post-amputation3_cin_SRR3953079	SRR3953079	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-1-day-post-amputation1_cin_SRR3953080	SRR3953080	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-1-day-post-amputation2_cin_SRR3953081	SRR3953081	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-1-day-post-amputation3_cin_SRR3953082	SRR3953082	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-3-days-post-amputation1_cin_SRR3953083	SRR3953083	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-3-days-post-amputation2_cin_SRR3953084	SRR3953084	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-3-days-post-amputation3_cin_SRR3953085	SRR3953085	https://www.ncbi.nlm.nih.gov/pubmed/28432214
C-robusta-8-days-post-amputation_cin_SRR3953086	SRR3953086	https://www.ncbi.nlm.nih.gov/pubmed/28432214

Cin-Mir-4127

Relative expression

Relative expression

Legend
both truncated	5' elongated	3' elongated	both elongated	5' truncated	3' truncated	canonical
both truncated mismatch	5' elongated mismatch	3' elongated mismatch	both elongated mismatch	5' truncated mismatch	3' truncated mismatch	canonical mismatch

Global results

ratio mature/star: 38.54/1.56 = 24.71

Global results

ratio mature/star: 38.54/1.56 = 24.71
ratio mature (mismatch)/star (mismatch): 0.0/0.0 = None

mature (isoform content): 0.0% (homogeneous)
star (isoform content): 0.0% (homogeneous)

Show details:

C-robusta-8-days-post-amputation_cin_SRR3953086

ratio mature/star: 173.0/7.0 = 24.71
ratio mature (mismatch)/star (mismatch): 0.0/0.0 = None

mature (isoform content): 0.0% (homogeneous)
star (isoform content): 0.0% (homogeneous)

C-robusta-8-days-post-amputation_cin_SRR3953086

ratio mature/star: 173.0/7.0 = 24.71

Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	G	G	C	A	G	C	U	G	U	G	A	G	A	G	A	A	G	U	U	G	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		6	1.34
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	G	G	C	A	G	C	U	G	U	G	A	G	A	G	A	A	G	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.22
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	G	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		164	36.54
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		7	1.56
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		2	0.45
U	U	G	U	G	A	A	A	A	A	U	U	U	U	U	A	U	G	G	C	C	G	U	U	U	C	A	A	G	U	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	G	U	G	U	G	A	U	A	A	U	C	A	A	C	A	G	G	C	A	G	C	U	G	U	G	A	G	A	G	A	A	G	U	U	G	C	A	A	G	A	G	A	C	G	G	G	A	A	C	U	U	U	C	U	G	C	U	G	A	C	U	U	C	A	A	A

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Reads

+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+		Reads	RPM	Other miRNA genes
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	G	G	C	A	G	C	U	G	U	G	A	G	A	G	A	A	G	U	U	G	C	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		6	1.34
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	A	G	G	C	A	G	C	U	G	U	G	A	G	A	G	A	A	G	U	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		1	0.22
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	G	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		164	36.54
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	G	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		7	1.56
-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-		2	0.45
U	U	G	U	G	A	A	A	A	A	U	U	U	U	U	A	U	G	G	C	C	G	U	U	U	C	A	A	G	U	G	A	C	A	G	C	U	C	G	C	U	C	A	G	C	U	G	G	C	U	G	U	G	U	G	A	U	A	A	U	C	A	A	C	A	G	G	C	A	G	C	U	G	U	G	A	G	A	G	A	A	G	U	U	G	C	A	A	G	A	G	A	C	G	G	G	A	A	C	U	U	U	C	U	G	C	U	G	A	C	U	U	C	A	A	A

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