MirGeneDB

MirGeneDB ID

Pmi-Mir-210

Family name MIR-210 (all species)
Seed UUGUGCG
Species Bat starfish (Patiria miniata)
MiRBase ID pmi-mir-210
Paralogues
Orthologues Aae-Mir-210-v1  Aae-Mir-210-v2  Aca-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bge-Mir-210-v1  Bge-Mir-210-v2  Bta-Mir-210  Cfa-Mir-210  Cgi-Mir-210  Cli-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Cte-Mir-210-P5  Cte-Mir-210-P6  Dan-Mir-210-v1  Dan-Mir-210-v2  Dme-Mir-210-v1  Dme-Mir-210-v2  Dmo-Mir-210-v1  Dmo-Mir-210-v2  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Efe-Mir-210  Ete-Mir-210  Gga-Mir-210  Hme-Mir-210-P3  Hme-Mir-210-P4  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lgi-Mir-210  Mdo-Mir-210  Mml-Mir-210  Mmu-Mir-210  Oan-Mir-210  Ocu-Mir-210  Pfl-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Spu-Mir-210-v1  Spu-Mir-210-v2  Sto-Mir-210-P1  Sto-Mir-210-P2  Tca-Mir-210-v1  Tca-Mir-210-v2  Tgu-Mir-210  Xtr-Mir-210 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Pmin1)
JH770142.1: 76062-76127 [+]
Precursor
(pre-Mir +30nt flank)
GCGCGAGCCCCGCCGAGUGCUGUGGACAUAAGUCACUGUCACGCGGCGCAAAGAGUGCUUCUCCGUCAAUUCUCUUGUGCGUGCGACAGCGACUGAUGUGUGCCGGCAAAAUUCAUCCAAAUAUCU
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Structure
        10         20         30        40        50        60   
GCGCGAGCCCCGCCGAG-    -|  G    A    A     A    G     A   UGCUUCU 
                  UGCU GUG ACAU AGUC CUGUC CGCG CGCAA GAG       C
                  ACGG CGU UGUA UCAG GACAG GUGC GUGUU CUC       C
UCUAUAAACCUACUUAAA    C^  G    G    C     C    -     -   UUAACUG 
    120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Pmi-Mir-210_5p* (predicted)

MirBase accessionNone
Sequence
0- AGUCACUGUCACGCGGCGCAAAGAG -25
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Mature sequence

Pmi-Mir-210_3p

MirBase accessionMIMAT0032167
Sequence
43- CUUGUGCGUGCGACAGCGACUGA -66
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