MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-90

Family name OCT-NOVEL-90 (all species)
Seed CUGACGC
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Obi-Novel-90 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01005660.1: 5089-5149 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGACCGACCUAUAUUCUGAUAUAAUGAGUAAUUUGGUGUUUGUGUCAACCUGGUAAUAAUUGAAAUAGGCUGACGCUAGUACCAAGUUCCUCAUUAUAAGAAAGCAUUCCAAACGCUUAU
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Structure
        10        20          30        40        50          
CUGACCGACCUAUAUUCUGA--|        U           U      A   GGUAAUA 
                      UAUAAUGAG AAUUUGGUGUU GUGUCA CCU       \
                      AUAUUACUC UUGAACCAUGA CGCAGU GGA       A
UAUUCGCAAACCUUACGAAAGA^        C           U      C   UAAAGUU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Star sequence

Ovu-Novel-90_5p*

mirBase accessionNone
Sequence
0- AAUUUGGUGUUUGUGUCAACCU -22
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Mature sequence

Ovu-Novel-90_3p

mirBase accessionNone
Sequence
39- GCUGACGCUAGUACCAAGUUCC -61
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