| MirGeneDB ID | Ovu-Novel-85 |
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| Family name |
OCT-NOVEL-85 (all species) |
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| Seed |
GUUUAUG |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-85
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01010839.1: 232390-232452 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGAUGGAGGAGGACACAGUGUUUGAGUUCCUGUUUAUGAAUGACUGCUCUCAAUGCAGACUCAGAGUCUGAGAUGCAGCAGCACAUGAACAGGUUCUUCUCUGUAUUCUAUGAAUUUGACCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AGAUGGAGGAGGACACAGUGUUU-- UU AA-| A - AUGCAGA
GAG CCUGUUUAUG UG CUGC UCUCA C
UUC GGACAAGUAC AC GACG AGAGU U
CUCCAGUUUAAGUAUCUUAUGUCUC UU ACG^ - U CUGAGAC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-85_5p |
| mirBase accession | None |
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| Sequence |
0- UGUUUAUGAAUGACUGCUCUCA -22
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-85_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- AGAUGCAGCAGCACAUGAACAGG -63
Get sequence
|
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