| MirGeneDB ID | Ovu-Novel-83 |
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| Family name |
OCT-NOVEL-83 (all species) |
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| Seed |
ACCGCUU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-83
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01025585.1: 22530-22585 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUUUUCUUUUGUUCAGUGGACUUCUUUCCCAACCGCUUGUUGUUGCCUUCUUGUAUUAUUCUACGAAGGUGGCAUCAAAGGGUCAGGAAAGGGAACCUUAUUCUGCAACAAACACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUUUUCUUUUGUUCAGU--| AC CA G GU- UG UUGUAU
GG UUCUUUCC ACC CUU UGU CCUUC U
CC GGGAAAGG UGG GAA ACG GGAAG A
ACACAAACAACGUCUUAUU^ AA AC - ACU GU CAUCUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-83_5p |
| mirBase accession | None |
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| Sequence |
0- AACCGCUUGUUGUUGCCUUCUU -22
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-83_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- GAAGGUGGCAUCAAAGGGUCAG -56
Get sequence
|
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