MirGeneDB ID | Ovu-Novel-82 |
Family name |
OCT-NOVEL-82 (all species) |
Seed |
CAGUCGG |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
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Orthologues |
Obi-Novel-82
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Node of Origin (locus) |
Octopus
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Node of Origin (family) |
Octopus
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Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01018129.1: 615191-615248 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CAUACACUGCCAAAGCUAUCUCGUUUAGCCAGUUUUAUUUGGUCCUGAUUGUUGUUCAGUCGGGGUACAGUCGGUCAAAUAAAGCUGGUUACACGAAACCUUUUCAUAUCAAUUUCUC
Get precursor sequence
|
Structure | 10 20 30 40 50
CAUACACUGCCAAAGCUAUC--| U U U UGUUCA
UCGU UAGCCAGUUUUAUUUGG CC GAUUGU G
AGCA AUUGGUCGAAAUAAACU GG CUGACA U
CUCUUUAACUAUACUUUUCCAA^ C - - UGGGGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | No |
Tissue expression
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Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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Star sequence |
Ovu-Novel-82_5p* |
mirBase accession | None |
Sequence |
0- AGUUUUAUUUGGUCCUGAUUGUUG -24
Get sequence
|
Mature sequence |
Ovu-Novel-82_3p |
mirBase accession | None |
Sequence |
36- ACAGUCGGUCAAAUAAAGCUGG -58
Get sequence
|