| MirGeneDB ID | Ovu-Novel-78 |
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| Family name |
OCT-NOVEL-78 (all species) |
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| Seed |
GUAGCCA |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-78
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01073751.1: 673279-673337 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUGCCUCACCCAGUCCGUGCCUGGCCAAGCUGUAGCCACCUCGCUCCGCAGACGUUCUCACGCACCGUCCGCAGGCGAAGUGACACAUUCGACCCAAAACUUCUUCCUGCAGGACAACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUGCCUCACCCAGUCCGUGCC--| CCAAGC AGC C CC A UUCUC
UGG UGU CAC UCGCU GC GACG \
ACC ACA GUG AGCGG CG CUGC A
ACAACAGGACGUCCUUCUUCAAA^ CAGCUU CA- A A- C CACGC
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-78_5p |
| mirBase accession | None |
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| Sequence |
0- UGUAGCCACCUCGCUCCGCAGACG -24
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-78_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- UCCGCAGGCGAAGUGACACAUU -59
Get sequence
|
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