MirGeneDB ID | Ovu-Novel-75 |
Family name |
OCT-NOVEL-75 (all species) |
Seed |
CUCAUGU |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
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Orthologues |
Obi-Novel-75
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Node of Origin (locus) |
Octopus
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Node of Origin (family) |
Octopus
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Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01064100.1: 222756-222816 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
UCCUUGAAGAGAAAGGAGAUCGGAAACACUUCUCAUGUGUACAUUGAGACGUUUUGAACAUCUGAAAACAUCUCAUGUCUACAUAGAGACGUGUUGAGGGUCAAUACUGAACGGAUAUGUU
Get precursor sequence
|
Structure | 10 20 30 40 50
UCCUUGAAGAGAAAGGA-- GGA U -| U U C UUGAAC
GAUC AACAC UCUC AUGUG ACAU GAGA GUU \
CUGG UUGUG AGAG UACAU UGUA CUCU CAA A
UUGUAUAGGCAAGUCAUAA GAG C A^ C - A AAGUCU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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Mature sequence |
Ovu-Novel-75_5p |
mirBase accession | None |
Sequence |
0- UCUCAUGUGUACAUUGAGACGUU -23
Get sequence
|
Co-mature sequence |
Ovu-Novel-75_3p |
mirBase accession | None |
Sequence |
38- CAUCUCAUGUCUACAUAGAGACG -61
Get sequence
|