MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-66

Family name OCT-NOVEL-66 (all species)
Seed CAAUUUC
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Obi-Novel-66 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01057936.1: 143996-144048 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCCAUCCACUGAUUUGACAAAAAAGGUCUCACUCCUACUUCAAGGUUGGAUGUUUACUAUUCAAUUUCAAAGCAGGAGUGGUACCUUUUUGUCACCAGCUUCAAGAAUUUAU
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Structure
        10           20        30        40        50      
AUCCAUCCACUGAUUUG---|      A   CU       A   CA         GUU 
                    ACAAAAA GGU  CACUCCU CUU  AGGUUGGAU   \
                    UGUUUUU CCA  GUGAGGA GAA  UUUAACUUA   U
UAUUUAAGAACUUCGACCAC^      -   UG       C   AC         UCA 
 110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Star sequence

Ovu-Novel-66_5p*

mirBase accessionNone
Sequence
0- CACUCCUACUUCAAGGUUGGAU -22
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Mature sequence

Ovu-Novel-66_3p

mirBase accessionNone
Sequence
31- UCAAUUUCAAAGCAGGAGUGGU -53
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