| MirGeneDB ID | Ovu-Novel-60 |
|---|
| Family name |
OCT-NOVEL-60 (all species) |
|---|
| Seed |
UUGGACU |
|---|
| Species |
Common octopus (Octopus vulgaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Obi-Novel-60
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01029868.1: 191463-191526 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUAAUCGGAUUUGAGAGUGUAGUUAUUGCAUGGGAAAUGUGAAGUUCAAGGAGUAUAUAGUAAGACGUUUCUUUGGACUUCGUCAUUUUCCAUUUUAUAUCUGCUCUGUCAUUGUAACUCUGGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUAAUCGGAUUUGAGAGU-- U UGC -| GUAUAUAG
GUAG UAU AUGGGAAAUG UGAAGUUCAAGGA \
CGUC AUA UACCUUUUAC GCUUCAGGUUUCU U
UGGUCUCAAUGUUACUGUCU U UUU U^ UUGCAGAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Ovu-Novel-60_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGGGAAAUGUGAAGUUCAAGGA -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-60_3p |
| mirBase accession | None |
|---|
| Sequence |
41- UUUGGACUUCGUCAUUUUCCAUU -64
Get sequence
|
|---|
