MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-5

Family name CEP-NOVEL-5 (all species)
Seed GUUCCUA
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Esc-Novel-5  Npo-Novel-5  Obi-Novel-5 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01019738.1: 354-413 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUAUUCUGUUACCAAACUUUUCUAUCAUAUUCGGUCCUUUUUGGGACCUCGUUUCAAUCUAACGGAAGUUCCUAGAUGGACUGAGAAUGGUAGGUAAGUUCGACCACCAUAGCACCCU
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Structure
        10          20        30        40        50         
AAAUAUUCUGUUACCAA--|   U        A        U   U     C  GUUUCA 
                   ACUU UCUAUCAU UUCGGUCC UUU GGGAC UC      A
                   UGAA GGAUGGUA GAGUCAGG AGA CCUUG AG      U
UCCCACGAUACCACCAGCU^   U        A        U   U     A  GCAAUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Star sequence

Ovu-Novel-5_5p*

mirBase accessionNone
Sequence
0- AUUCGGUCCUUUUUGGGACCUC -22
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Mature sequence

Ovu-Novel-5_3p

mirBase accessionNone
Sequence
38- AGUUCCUAGAUGGACUGAGAAU -60
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