MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-41

Family name COL-NOVEL-41 (all species)
Seed UCCGGAG
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Esc-Novel-41  Obi-Novel-41 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01063127.1: 10728-10784 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAUACAAACCUUUGAUGCGAUGUGAGUGGUUCCGGAGUUUCACACCCAUCAGUCACAACAGUCGAUGGGUGUGAACCUCUAGAAAAUCUCACAUUGGUCUUUCACCAACCGACAAU
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Structure
        10          20        30        40        50        
UGAUACAAACCUUUGAUG--|        UGG   CG   U            AGUCAC 
                    CGAUGUGAG   UUC  GAG UUCACACCCAUC      \
                    GUUACACUC   AAG  CUC AAGUGUGGGUAG      A
UAACAGCCAACCACUUUCUG^        UAA   AU   C            CUGACA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Mature sequence

Ovu-Novel-41_5p

mirBase accessionNone
Sequence
0- UUCCGGAGUUUCACACCCAUCA -22
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Star sequence

Ovu-Novel-41_3p*

mirBase accessionNone
Sequence
35- AUGGGUGUGAACCUCUAGAAAA -57
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