MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-35-v1

Family name COL-NOVEL-35 (all species)
Seed ACGAACA
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Novel-35-v2  Ovu-Novel-35-v3 
Orthologues Esc-Novel-35-v1  Obi-Novel-35-v1 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01029033.1: 2110-2168 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUCUUUUUAUUAUCCAUUGCAGUUGUUAUACGAACAAGUGGCUGUCGGUUGAAUUUUACACACAUCCGCGAUCACUUGUUGUAUGAAGGCAAACGCGUGGAACUUUCGUCUGGUUUU
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Structure
        10               20        30        40        50         
UCUUCUUUUUAUUAUCCA-------|   AGUUG      G        GC  U   U  AAUUU 
                         UUGC     UUAUAC AACAAGUG  UG CGG UG     \
                         AACG     AGUAUG UUGUUCAC  GC GCC AC     U
UUUUGGUCUGCUUUCAAGGUGCGCA^   GA---      -        UA  -   U  ACACA 
       110       100        90            80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Mature sequence

Ovu-Novel-35-v1_5p

mirBase accessionNone
Sequence
0- UACGAACAAGUGGCUGUCGGUUG -23
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Co-mature sequence

Ovu-Novel-35-v1_3p

mirBase accessionNone
Sequence
36- UCCGCGAUCACUUGUUGUAUGAA -59
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