MirGeneDB ID | Ovu-Novel-32 |
Family name |
COL-NOVEL-32 (all species) |
Seed |
CGAUGGA |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
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Orthologues |
Esc-Novel-32
Obi-Novel-32
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Node of Origin (locus) |
Coleoidea
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Node of Origin (family) |
Coleoidea
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Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01052469.1: 136125-136187 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
GCCAAGACACAUACGAGUAUAUCGUCUGAACCGAUGGAUCUGUUACGUGACACGAUGGUAUGUACUGACAUUGUUGACGUAACACCAUUGCGCAGAGAUAUAUGAUUGCACGCGAGGGGAGUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCCAAGACACAUACGAG----| G AAC AUC GAC GUAUG
UAUAUC UCUG CGAUGG UGUUACGU ACGAUG \
AUAUAG AGAC GUUACC ACAAUGCA UGUUAC U
GUGAGGGGAGCGCACGUUAGU^ - GC- --- GU- AGUCA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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Mature sequence |
Ovu-Novel-32_5p |
mirBase accession | None |
Sequence |
0- CCGAUGGAUCUGUUACGUGACACGAUG -27
Get sequence
|
Co-mature sequence |
Ovu-Novel-32_3p |
mirBase accession | None |
Sequence |
40- UUGUUGACGUAACACCAUUGCGC -63
Get sequence
|