MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-22

Family name COL-NOVEL-22 (all species)
Seed UUUCUGU
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Esc-Novel-22-v1  Esc-Novel-22-v2  Obi-Novel-22 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01016877.1: 674316-674374 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGAGUUAAAGCCUUGGCGUUCAGGGUAUGUUUUCUGUUGCGCCAAGGGCAUACGUAUUUCUACUAUGCUCUGUCGUACCAAGAAUACAUAUCUAUCGCCCCUUCUCCACUGACUUCGU
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Structure
        10        20          30         40        50         
UUGAGUUAAAGCCUUGGCGUUCA--        U    GU-|   CCA        CGUAU 
                         GGGUAUGU UUCU   UGCG   AGGGCAUA     \
                         UCUAUACA AAGA   AUGC   UCUCGUAU     U
UGCUUCAGUCACCUCUUCCCCGCUA        U    ACC^   UG-        CAUCU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Mature sequence

Ovu-Novel-22_5p

mirBase accessionNone
Sequence
0- UUUUCUGUUGCGCCAAGGGCAUA -23
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Star sequence

Ovu-Novel-22_3p*

mirBase accessionNone
Sequence
36- UGCUCUGUCGUACCAAGAAUACA -59
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