MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-13

Family name COL-NOVEL-13 (all species)
Seed UAGCUGU
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Esc-Novel-13  Obi-Novel-13 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01000071.1: 153340-153395 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAUAUAUGGAAAACACGUGGGUGUGUCUGAUGGUGAUGAGGUCAGUUUGUCUUUCAUAAUGUGAUUAGCUGUCUCAUGAUCUUCAGGCAUACAUUUACAAUAAUCCAUCGAAGUU
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Structure
        10        20          30        40        50        
GCAUAUAUGGAAAACACGUGG--|         U   G      U     U   UUUCA 
                       GUGUGUCUGA GGU AUGAGG CAGUU GUC     \
                       CAUACGGACU CUA UACUCU GUCGA UAG     U
UUGAAGCUACCUAAUAACAUUUA^         U   G      -     U   UGUAA 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Star sequence

Ovu-Novel-13_5p*

mirBase accessionNone
Sequence
0- AUGGUGAUGAGGUCAGUUUGUC -22
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Mature sequence

Ovu-Novel-13_3p

mirBase accessionNone
Sequence
35- UUAGCUGUCUCAUGAUCUUCA -56
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