MirGeneDB 2.1

MirGeneDB ID

Ovu-Novel-12

Family name CEP-NOVEL-12 (all species)
Seed UUGGCAU
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Esc-Novel-12  Npo-Novel-12  Obi-Novel-12 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01047956.1: 61366-61423 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGUUAUUGACAAAAGAGCUUGCGUGUAUGUUUGGCAUGGCAACCGCUUUGUGUAUAAGGCAUCACUAGUCGUUGACAUGCGCAAUACGUACGCGUAGACAUCGUACAGCCGAGCAAU
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Structure
        10         20        30          40        50        
UGGUUAUUGACAAAAGAGC-            -   -|    G    C   UU  GUAUA 
                    UUGCGUGUAUGU UUG GCAUG CAAC GCU  GU     A
                    GAUGCGCAUGCA AAC CGUAC GUUG UGA  CA     G
UAACGAGCCGACAUGCUACA            U   G^    A    C   U-  CUACG 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Mature sequence

Ovu-Novel-12_5p

mirBase accessionNone
Sequence
0- UUUGGCAUGGCAACCGCUUUGU -22
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Star sequence

Ovu-Novel-12_3p*

mirBase accessionNone
Sequence
35- CUAGUCGUUGACAUGCGCAAUAC -58
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