| MirGeneDB ID | Ovu-Mir-216-P2k |
|---|
| Family name |
MIR-216 (all species) |
|---|
| Seed |
AAUCUCA |
|---|
| Species |
Common octopus (Octopus vulgaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Ovu-Mir-216-P2j
|
|---|
| Orthologues |
Aae-Mir-216-P2
Asu-Mir-216-P2
Bfl-Mir-216-P2
Bge-Mir-216-P2
Bla-Mir-216-P2
Bpl-Mir-216-P2
Cbr-Mir-216-P2
Cel-Mir-216-P2
Cgi-Mir-216-P2
Dan-Mir-216-P2
Dma-Mir-216-P2
Dme-Mir-216-P2
Dmo-Mir-216-P2
Dpu-Mir-216-P2
Dsi-Mir-216-P2
Dya-Mir-216-P2
Efe-Mir-216-P2
Esc-Mir-216-P2k
Hme-Mir-216-P2
Isc-Mir-216-P2
Lgi-Mir-216-P2
Npo-Mir-216-P2k
Obi-Mir-216-P2k
Tca-Mir-216-P2
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Bilateria
|
|---|
Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01022029.1: 185931-185990 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GUGUUUAUAAUCCUUUUUUUGAUCUUUGUGUAAUCUCAGUUAGUAAUUCCGAGUGGAUAAGAUAGCCUCAAGUUACUAGCCGAGAUUACAUGAAUGUCUCAGCUAACAGCAUGAAUCCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGUUUAUAAUCCUUUUUUU--| C UG A CC UGGAUA
GAU UU UGUAAUCUC GUUAGUAAUU GAG \
CUG AA ACAUUAGAG CGAUCAUUGA CUC A
CACCUAAGUACGACAAUCGACU^ U GU C A- CGAUAG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Ovu-Mir-216-P2k_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAAUCUCAGUUAGUAAUUCCGAG -23
Get sequence
|
|---|
| Co-mature sequence |
Ovu-Mir-216-P2k_3p |
| mirBase accession | None |
|---|
| Sequence |
38- CAAGUUACUAGCCGAGAUUACA -60
Get sequence
|
|---|
