MirGeneDB ID | Obi-Novel-89 |
Family name |
OCT-NOVEL-89 (all species) |
Seed |
CCUGCGG |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Ovu-Novel-89
|
Node of Origin (locus) |
Octopus
|
Node of Origin (family) |
Octopus
|
Genome context (PRJNA270931_OBI) |
KQ417724: 424086-424140 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GACGCUACUGAUGUUUUCAUGAAGCCCGUUUCCUGCGGCGUUUCUGACAGAAAAAAUAGUGUUUUUGCCGAUUGGCCGCAGAGGUAUGGUCUGCAUUGCAUAACCACAUUCAGAA
Get precursor sequence
|
Structure | 10 20 30 40 50
GACGCUACUGAUGUUUUC- A C U -| GUU U A AAA
AUG AG CCGU UC CUGCGGC UC G CAGAAA U
UAC UC GGUA GG GACGCCG AG C GUUUUU A
AAGACUUACACCAAUACGU G U U A^ GUU - C GUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Obi-Novel-89_5p |
mirBase accession | None |
Sequence |
0- UCCUGCGGCGUUUCUGACAGAAA -23
Get sequence
|
Star sequence |
Obi-Novel-89_3p* |
mirBase accession | None |
Sequence |
33- UUUGCCGAUUGGCCGCAGAGGU -55
Get sequence
|