MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-88

Family name OCT-NOVEL-88 (all species)
Seed CUGCUGA
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Ovu-Novel-88 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(PRJNA270931_OBI)
KQ420605: 265986-266047 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUUUAAGUUGUAUUCCUGGUAAAUAAACUCUGCUGAUUCCUUACGAAGCCUCCAUAGUUCCAGUUGGGGCUCGUGGGUUAACAACAGAGUUUUUUUCUGCCAGAAUAUGAAGACAACUUU
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Structure
        10        20          30        40        50        60 
UCGUUUAAGUUGUAUUCC     AAU--|       C  AUUC       A    CCAUAGU 
                  UGGUA     AAACUCUG UG    CUUACGA GCCU       \
                  ACCGU     UUUGAGAC AC    GGGUGCU CGGG       U
UUUCAACAGAAGUAUAAG     CUUUU^       A  AAUU       -    GUUGACC 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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To
Mature sequence

Obi-Novel-88_5p

mirBase accessionNone
Sequence
0- UCUGCUGAUUCCUUACGAAGCCU -23
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Star sequence

Obi-Novel-88_3p*

mirBase accessionNone
Sequence
40- GCUCGUGGGUUAACAACAGAGU -62
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