MirGeneDB ID | Obi-Novel-86 |
Family name |
OCT-NOVEL-86 (all species) |
Seed |
GCACGAC |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Ovu-Novel-86
|
Node of Origin (locus) |
Octopus
|
Node of Origin (family) |
Octopus
|
Genome context (PRJNA270931_OBI) |
KQ426038: 6982-7039 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCUUUAUGAAGGCUGCACCAUGGGUUAGUUUGCACGACGCAGUUGUAUCACGGCGUCUCUUCAGCAGCGAUCAAUUGAACCGUGUUAACUGGCCCUAAGACGGCGACUUUGGACGGAC
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|
Structure | 10 20 30 40 50
UCUUUAUGAAGGCUGCACCAU--| U ACG U ACG CGUCU
GGGUUAGUU GCACG CAGUUG AUC G \
CCCGGUCAA UGUGC GUUAAC UAG C C
CAGGCAGGUUUCAGCGGCAGAAU^ U CAA - CGA GACUU
110 100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Obi-Novel-86_5p |
mirBase accession | None |
Sequence |
0- UGCACGACGCAGUUGUAUCACGG -23
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|
Star sequence |
Obi-Novel-86_3p* |
mirBase accession | None |
Sequence |
36- GCGAUCAAUUGAACCGUGUUAA -58
Get sequence
|