| MirGeneDB ID | Obi-Novel-85 |
|---|
| Family name |
OCT-NOVEL-85 (all species) |
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| Seed |
GUUUAUG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Novel-85
|
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| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ425702: 280065-280127 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUAGAGGAGGACACAGUGUGUGAGUUCCUGUUUAUGAAUGACUGCUCUCAAUGCAGACUCAGAGUCUGAGAUGCAGCAGCACAUGAACAGGUUCUUCUCUGUAUUCUAUGAAUUUGGCCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAAUAGAGGAGGACACAGUGUGU-- UU AA-| A - AUGCAGA
GAG CCUGUUUAUG UG CUGC UCUCA C
UUC GGACAAGUAC AC GACG AGAGU U
CUCCGGUUUAAGUAUCUUAUGUCUC UU ACG^ - U CUGAGAC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Obi-Novel-85_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUUAUGAAUGACUGCUCUCA -22
Get sequence
|
|---|
| Star sequence |
Obi-Novel-85_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- AGAUGCAGCAGCACAUGAACAGG -63
Get sequence
|
|---|
