| MirGeneDB ID | Obi-Novel-81-v1 |
|---|
| Family name |
OCT-NOVEL-81 (all species) |
|---|
| Seed |
AGGAGCU |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-81-v2
|
|---|
| Orthologues |
Ovu-Novel-81-v1
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ418719: 174845-174904 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUGUUUAUUAGAUCAACAUCUUGGGAAACCACUUUAAUAUGCAGUCUCCUUUAGUCUGUCUAAUUAAAAGGAGCUGUGUAUUAGAAGAGAUUUGCCAAGAAAUCAGGCACCAAAAUUCUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUGUUUAUUAGAUCAACA-- G CCAC-| U AGUCUG
UCUUGG AAA UUUAAUAUGCAG CUCCUUU U
AGAACC UUU AGAUUAUGUGUC GAGGAAA C
AUCUUAAAACCACGGACUAA G AGAGA^ - AUUAAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-81-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACUUUAAUAUGCAGUCUCCUUUA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-81-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AAGGAGCUGUGUAUUAGAAGAGA -60
Get sequence
|
|---|
