MirGeneDB ID | Obi-Novel-79 |
Family name |
OCT-NOVEL-79 (all species) |
Seed |
CGAUGAU |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Ovu-Novel-79
|
Node of Origin (locus) |
Octopus
|
Node of Origin (family) |
Octopus
|
Genome context (PRJNA270931_OBI) |
KQ425531: 383563-383623 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCCAUGCUUCUGCGGAGUCCGUACAUCUGCUGUGCCUCAUUGAUUUUCAUUGAGCAGAUUCUAGAAGGUUCGAUGAUCAGUGAGACAGAGGUGAAGUGCUGUGCCAGCGACAUGUGACAUC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCCAUGCUUCUGCGGAGUCC--| A UG G C UUU AGAUU
GUAC UC CU UG CUCAUUGA UCAUUGAGC C
CGUG AG GA AC GAGUGACU AGUAGCUUG U
CUACAGUGUACAGCGACCGUGU^ A UG G A --- GAAGA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Obi-Novel-79_5p* |
mirBase accession | None |
Sequence |
0- UGUGCCUCAUUGAUUUUCAUUGAGC -25
Get sequence
|
Mature sequence |
Obi-Novel-79_3p |
mirBase accession | None |
Sequence |
39- UCGAUGAUCAGUGAGACAGAGG -61
Get sequence
|